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    RDN37-1 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 9164931, updated on 7-Jan-2024

    Summary

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    Gene symbol
    RDN37-1
    Primary source
    SGD:S000006486
    Locus tag
    YNCL0010C
    See related
    AllianceGenome:SGD:S000006486
    Gene type
    miscRNA
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
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    Genomic context

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    See RDN37-1 in Genome Data Viewer
    Location:
    chromosome: XII
    Exon count:
    1
    Sequence:
    Chromosome: XII; NC_001144.5 (451575..458432, complement)

    Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene tRNA-Gln Neighboring gene Rnh203p Neighboring gene 25S ribosomal RNA Neighboring gene miscRNA Neighboring gene 5.8S ribosomal RNA Neighboring gene miscRNA Neighboring gene Tar1p Neighboring gene miscRNA Neighboring gene 18S ribosomal RNA Neighboring gene miscRNA Neighboring gene 5S ribosomal RNA Neighboring gene miscRNA Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001144.5

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary mobility of the ribosomal DNA array in yeasts. Proux-Wéra E, et al. Genome Biol Evol, 2013. PMID 23419706, Free PMC Article
    2. Silencing in yeast rDNA chromatin: reciprocal relationship in gene expression between RNA polymerase I and II. Cioci F, et al. Mol Cell, 2003 Jul. PMID 12887899
    3. Complete deletion of yeast chromosomal rDNA repeats and integration of a new rDNA repeat: use of rDNA deletion strains for functional analysis of rDNA promoter elements in vivo. Wai HH, et al. Nucleic Acids Res, 2000 Sep 15. PMID 10982872, Free PMC Article
    4. U14 small nucleolar RNA makes multiple contacts with the pre-ribosomal RNA. Morrissey JP, et al. Chromosoma, 1997 Jun. PMID 9211979
    5. RNAP-II transcribes two small RNAs at the promoter and terminator regions of the RNAP-I gene in Saccharomyces cerevisiae. Mayán MD. Yeast, 2013 Jan. PMID 23280698

    See all (37) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    • 35S ribosomal RNA (35S rRNA) transcript; encoded by the RDN1 locus; processed into the 25S, 18S and 5.8S rRNAs (represented by the RDN25, RDN18, and RDN58 loci)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001144.5 Reference assembly

      Range
      451575..458432 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_132207.1 RNA Sequence

      Status: REVIEWED

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Research Materials