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    OMS1 putative RNA methyltransferase [ Saccharomyces cerevisiae S288C ]

    Gene ID: 851911, updated on 9-Jun-2024

    Summary

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    Gene symbol
    OMS1
    Gene description
    putative RNA methyltransferase
    Primary source
    FungiDB:YDR316W
    Locus tag
    YDR316W
    See related
    SGD:S000002724; AllianceGenome:SGD:S000002724; VEuPathDB:YDR316W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to enable S-adenosylmethionine-dependent methyltransferase activity. Predicted to be involved in methylation. Located in mitochondrial envelope. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See OMS1 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    1
    Sequence:
    Chromosome: IV; NC_001136.10 (1093763..1095178)

    Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene Rad34p Neighboring gene inositol pentakisphosphate 2-kinase Neighboring gene tRNA-Phe Neighboring gene gag protein Neighboring gene gag-pol fusion protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001136.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Predicting gene function in a hierarchical context with an ensemble of classifiers. Guan Y, et al. Genome Biol, 2008. PMID 18613947, Free PMC Article
    2. A yeast mitochondrial membrane methyltransferase-like protein can compensate for oxa1 mutations. Lemaire C, et al. J Biol Chem, 2004 Nov 12. PMID 15355998
    3. Probabilistic approach to predicting substrate specificity of methyltransferases. Szczepińska T, et al. PLoS Comput Biol, 2014 Mar. PMID 24651469, Free PMC Article
    4. S-Adenosylmethionine-dependent methylation in Saccharomyces cerevisiae. Identification of a novel protein arginine methyltransferase. Niewmierzycka A, et al. J Biol Chem, 1999 Jan 8. PMID 9873020
    5. Oms1 associates with cytochrome c oxidase assembly intermediates to stabilize newly synthesized Cox1. Bareth B, et al. Mol Biol Cell, 2016 May 15. PMID 27030670, Free PMC Article

    See all (41) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Analyses show that Oms1 participates in cytochrome c oxidase assembly by stabilizing newly synthesized Cox1.
      Title: Oms1 associates with cytochrome c oxidase assembly intermediates to stabilize newly synthesized Cox1.
    2. Data show that Oms1p is a mitochondrial inner membrane protein inserted independently of Oxa1p.
      Title: A yeast mitochondrial membrane methyltransferase-like protein can compensate for oxa1 mutations.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables S-adenosylmethionine-dependent methyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    involved_in methylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrial envelope IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative RNA methyltransferase
    NP_010602.3
    • Protein integral to the mitochondrial membrane; has a conserved methyltransferase motif and is predicted to be an RNA methyltransferase; multicopy suppressor of respiratory defects caused by OXA1 mutations

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001136.10 Reference assembly

      Range
      1093763..1095178
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001180624.3 → NP_010602.3  TPA: putative RNA methyltransferase [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_010602.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VSU5, Q06668
      UniProtKB/TrEMBL
      A0A8H8UNL5, A6ZYR4, B5VGJ5, C7GWL3, C8Z5M7, N1P6W3
      Conserved Domains (1) summary
      pfam13649
      Location:245 → 355
      Methyltransf_25; Methyltransferase domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q06668.1

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