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    SWS2 putative mitochondrial 37S ribosomal protein SWS2 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 855643, updated on 9-Jun-2024

    Summary

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    Gene symbol
    SWS2
    Gene description
    putative mitochondrial 37S ribosomal protein SWS2
    Primary source
    FungiDB:YNL081C
    Locus tag
    YNL081C
    See related
    SGD:S000005025; AllianceGenome:SGD:S000005025; VEuPathDB:YNL081C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    uS13m
    Summary
    A structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Part of mitochondrial small ribosomal subunit. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See SWS2 in Genome Data Viewer
    Location:
    chromosome: XIV
    Exon count:
    1
    Sequence:
    Chromosome: XIV; NC_001146.8 (476188..476619, complement)

    Chromosome XIV - NC_001146.8Genomic Context describing neighboring genes Neighboring gene Ca(2+)-binding ATP:ADP antiporter SAL1 Neighboring gene ATP-binding mismatch repair protein Neighboring gene Eos1p Neighboring gene tropomyosin TPM1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001146.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of novel causative genes determining the complex trait of high ethanol tolerance in yeast using pooled-segregant whole-genome sequence analysis. Swinnen S, et al. Genome Res, 2012 May. PMID 22399573, Free PMC Article
    2. Four linked genes participate in controlling sporulation efficiency in budding yeast. Ben-Ari G, et al. PLoS Genet, 2006 Nov 17. PMID 17112318, Free PMC Article
    3. Dominant Epistasis Between Two Quantitative Trait Loci Governing Sporulation Efficiency in Yeast Saccharomyces cerevisiae. Bergman J, et al. Food Technol Biotechnol, 2015 Dec. PMID 27904371, Free PMC Article
    4. Analysis of deletion phenotypes and GFP fusions of 21 novel Saccharomyces cerevisiae open reading frames. Brachat A, et al. Yeast, 2000 Feb. PMID 10649453
    5. Uncovering novel cell cycle players through the inactivation of securin in budding yeast. Sarin S, et al. Genetics, 2004 Nov. PMID 15579722, Free PMC Article

    See all (43) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. MKT1, SWS2, and APJ1 are associated with high ethanol tolerance in Saccharomyces cerevisiae.
      Title: Identification of novel causative genes determining the complex trait of high ethanol tolerance in yeast using pooled-segregant whole-genome sequence analysis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in mitochondrial translation IC
    Inferred by Curator
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of mitochondrial small ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in peroxisome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    putative mitochondrial 37S ribosomal protein SWS2
    NP_014318.3
    • Component of mitochondrial small ribosomal subunit; similar to E. coli S13 ribosomal protein; participates in controlling sporulation efficiency; localizes to vacuole in response to H2O2; localizes to peroxisomes in glucose-growing cells

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001146.8 Reference assembly

      Range
      476188..476619 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182919.3 → NP_014318.3  TPA: putative mitochondrial 37S ribosomal protein SWS2 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_014318.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W198, P53937, Q45TY3
      UniProtKB/TrEMBL
      A0A6L0YIZ4, A6ZRZ9, B3LNU0, C7GUN1, C8ZGE9, G2WM23, N1NXY8
      Conserved Domains (1) summary
      COG0099
      Location:2 → 112
      RpsM; Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P53937.1

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