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    RPS1B ribosomal 40S subunit protein S1B [ Saccharomyces cerevisiae S288C ]

    Gene ID: 854939, updated on 3-Nov-2024

    Summary

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    Official Symbol
    RPS1B
    Official Full Name
    ribosomal 40S subunit protein S1B
    Primary source
    SGD:S000004528
    Locus tag
    YML063W
    See related
    AllianceGenome:SGD:S000004528; FungiDB:YML063W; VEuPathDB:YML063W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    PLC2; RP10B
    Summary
    Predicted to be a structural constituent of ribosome. Involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Part of 90S preribosome. Orthologous to human RPS3A (ribosomal protein S3A). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See RPS1B in Genome Data Viewer
    Location:
    chromosome: XIII
    Exon count:
    1
    Sequence:
    Chromosome: XIII; NC_001145.3 (146482..147249)

    Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene origin recognition complex subunit 1 Neighboring gene Ras family GTPase TEM1 Neighboring gene Mft1p Neighboring gene DNA helicase PIF1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001145.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A gene family homologous to the S-phase specific gene in higher plants is essential for cell proliferation in Saccharomyces cerevisiae. Ito M, et al. FEBS Lett, 1992 Apr 13. PMID 1451783
    2. Structure and regulation of a Candida albicans RP10 gene which encodes an immunogenic protein homologous to Saccharomyces cerevisiae ribosomal protein 10. Swoboda RK, et al. J Bacteriol, 1995 Mar. PMID 7868597, Free PMC Article
    3. The protein encoded by the MFT1 gene is a targeting factor for mitochondrial precursor proteins, and not a core ribosomal protein. Beilharz T, et al. FEBS Lett, 1997 Apr 28. PMID 9166903
    4. Uncovering genetic relationships using small molecules that selectively target yeast cell cycle mutants. Nehil MT, et al. Chem Biol Drug Des, 2007 Apr. PMID 17461973
    5. Delayed correlation of mRNA and protein expression in rapamycin-treated cells and a role for Ggc1 in cellular sensitivity to rapamycin. Fournier ML, et al. Mol Cell Proteomics, 2010 Feb. PMID 19955083, Free PMC Article

    See all (124) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of 90S preribosome HDA PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of cytosolic small ribosomal subunit NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ribosomal 40S subunit protein S1B
    NP_013648.1
    • Ribosomal protein of the small (40S) subunit; homologous to mammalian ribosomal protein S3A, no bacterial homolog; RPS1B has a paralog, RPS1A, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001145.3 Reference assembly

      Range
      146482..147249
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182422.1 → NP_013648.1  TPA: ribosomal 40S subunit protein S1B [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013648.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A6ZM02, B3LLJ2, B5VP69, C7GVZ9, D6VZB0, P23248
      UniProtKB/TrEMBL
      C8ZEE2, G2WJZ2, N1P675
      Conserved Domains (1) summary
      pfam01015
      Location:22 → 221
      Ribosomal_S3Ae; Ribosomal S3Ae family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P23248.3

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