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    KTI12 KTI12 chromatin associated homolog [ Homo sapiens (human) ]

    Gene ID: 112970, updated on 2-Nov-2024

    Summary

    Official Symbol
    KTI12provided by HGNC
    Official Full Name
    KTI12 chromatin associated homologprovided by HGNC
    Primary source
    HGNC:HGNC:25160
    See related
    Ensembl:ENSG00000198841 AllianceGenome:HGNC:25160
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    TOT4; SBBI81
    Summary
    Predicted to enable ATP binding activity. Predicted to be involved in tRNA wobble uridine modification. [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
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    Genomic context

    See KTI12 in Genome Data Viewer
    Location:
    1p32.3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (52032103..52033810, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (51913615..51915323, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (52497775..52499482, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene RAB3B, member RAS oncogene family Neighboring gene ribosomal protein S26 pseudogene 14 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 883 Neighboring gene RNA, 7SL, cytoplasmic 290, pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:52470431-52471275 Neighboring gene Sharpr-MPRA regulatory region 8174 Neighboring gene thioredoxin domain containing 12 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1030 Neighboring gene TXNDC12 antisense RNA 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:52520887-52521291 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:52521457-52522170 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:52522171-52522882 Neighboring gene basic transcription factor 3 like 4

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC20419

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in tRNA wobble uridine modification IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    protein KTI12 homolog
    Names
    KTI12 homolog, chromatin associated

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_138417.3NP_612426.1  protein KTI12 homolog

      See identical proteins and their annotated locations for NP_612426.1

      Status: VALIDATED

      Source sequence(s)
      AF327348, AL445685, BC012173, BI909162
      Consensus CDS
      CCDS562.1
      UniProtKB/Swiss-Prot
      Q96EK9
      UniProtKB/TrEMBL
      B2R9D9
      Related
      ENSP00000360676.1, ENST00000371614.2
      Conserved Domains (1) summary
      pfam08433
      Location:3350
      KTI12; Chromatin associated protein KTI12

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      52032103..52033810 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      51913615..51915323 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)