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    HERC2P7 HERC2 pseudogene 7 [ Homo sapiens (human) ]

    Gene ID: 100132101, updated on 17-Sep-2024

    Summary

    Official Symbol
    HERC2P7provided by HGNC
    Official Full Name
    HERC2 pseudogene 7provided by HGNC
    Primary source
    HGNC:HGNC:4875
    See related
    AllianceGenome:HGNC:4875
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Annotation information
    Note: On NCBI's Build 37.1, HGNC and NCBI annotated this gene, HERC2P7 (HGNC id: 4875), at chromosome 15:28573729..28580221(+). As of August 2010 it was determined by NCBI and HGNC that HERC2P7 should be located at chromosome 15:23377989..23403847(+) where LOC100132101 is annotated in Build 37.1. [13 Feb 2013]
    Expression
    Ubiquitous expression in testis (RPKM 2.5), skin (RPKM 2.5) and 24 other tissues See more
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    Genomic context

    See HERC2P7 in Genome Data Viewer
    Location:
    15q11.2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (22479153..22482374, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (20151268..20154489, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (23390722..23393943)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene golgin A6 family like 22 Neighboring gene pectinesterase inhibitor 10-like Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr15:23375324-23375978 Neighboring gene HERC2 pseudogene 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:23311731-23312230 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr15:23306154-23306733 Neighboring gene HECT and RLD domain containing E3 ubiquitin protein ligase 2 pseudogene Neighboring gene uncharacterized LOC101927846 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:23263501-23264001 Neighboring gene RNA, 7SL, cytoplasmic 495, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_036470.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC100757, BC012949

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      22479153..22482374 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_021160017.1 Reference GRCh38.p14 PATCHES

      Range
      3372725..3375943 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187604.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      122789..126011 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      20151268..20154489 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)