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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_050616.2 RefSeqGene
- Range
-
170820..495387
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_000721.4 → NP_000712.2 voltage-dependent R-type calcium channel subunit alpha-1E isoform 3
See identical proteins and their annotated locations for NP_000712.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) is missing an in-frame coding exon compared to variant 1. This results in a shorter isoform (3, also known as alpha-1E-3) missing an internal protein segment compared to isoform 1.
- Source sequence(s)
-
AB209499, AK309070, AL160059, AL161734, BC037800, BP230397, KF510705, L29385
- Consensus CDS
-
CCDS53443.1
- UniProtKB/TrEMBL
-
F8W9Z1
- Related
- ENSP00000356542.1, ENST00000367570.6
- Conserved Domains (4) summary
-
- pfam17069
Location:1958 → 2089
- RSRP; Arginine/Serine-Rich protein 1
- pfam00520
Location:1477 → 1734
- Ion_trans; Ion transport protein
- pfam08763
Location:1807 → 1881
- Ca_chan_IQ; Voltage gated calcium channel IQ domain
- pfam16905
Location:1735 → 1805
- GPHH; Voltage-dependent L-type calcium channel, IQ-associated
-
NM_001205293.3 → NP_001192222.1 voltage-dependent R-type calcium channel subunit alpha-1E isoform 1
See identical proteins and their annotated locations for NP_001192222.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript, and encodes the longest isoform (1, also known as alpha-1E).
- Source sequence(s)
-
AL160059, AL161734, BP230397, BP230632, KF510705, L27745
- Consensus CDS
-
CCDS55664.1
- UniProtKB/Swiss-Prot
- B1AM12, B1AM13, B1AM14, Q14580, Q14581, Q15878
- UniProtKB/TrEMBL
-
F8W9Z1
- Related
- ENSP00000356545.2, ENST00000367573.7
- Conserved Domains (4) summary
-
- pfam00520
Location:1477 → 1734
- Ion_trans; Ion transport protein
- pfam08763
Location:1807 → 1881
- Ca_chan_IQ; Voltage gated calcium channel IQ domain
- pfam16905
Location:1735 → 1805
- GPHH; Voltage-dependent L-type calcium channel, IQ-associated
- cl28033
Location:1978 → 2200
- Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
-
NM_001205294.2 → NP_001192223.1 voltage-dependent R-type calcium channel subunit alpha-1E isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) is missing two non-consecutive in-frame coding exons compared to variant 1. This results in a shorter isoform (2, also known as alpha-1E-1) missing two internal protein segments compared to isoform 1.
- Source sequence(s)
-
AB209499, AK309070, AL160059, AL161734, BC037800, BP230397, KF510705, L29384
- Consensus CDS
-
CCDS55665.1
- UniProtKB/TrEMBL
-
F8W9Z1
- Related
- ENSP00000481619.1, ENST00000621791.4
- Conserved Domains (4) summary
-
- pfam17069
Location:1939 → 2070
- RSRP; Arginine/Serine-Rich protein 1
- pfam00520
Location:1458 → 1715
- Ion_trans; Ion transport protein
- pfam08763
Location:1788 → 1862
- Ca_chan_IQ; Voltage gated calcium channel IQ domain
- pfam16905
Location:1716 → 1786
- GPHH; Voltage-dependent L-type calcium channel, IQ-associated