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    FAM201A family with sequence similarity 201 member A [ Homo sapiens (human) ]

    Gene ID: 158228, updated on 17-Sep-2024

    Summary

    Official Symbol
    FAM201Aprovided by HGNC
    Official Full Name
    family with sequence similarity 201 member Aprovided by HGNC
    Primary source
    HGNC:HGNC:27239
    See related
    AllianceGenome:HGNC:27239
    Gene type
    ncRNA
    RefSeq status
    PREDICTED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C9orf122
    Expression
    Broad expression in bone marrow (RPKM 5.5), thyroid (RPKM 1.9) and 16 other tissues See more
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    Genomic context

    See FAM201A in Genome Data Viewer
    Location:
    9p13.1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (38621088..38623284)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (38645290..38647486)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (38621085..38623281)

    Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene cytochrome P450 family 4 subfamily F member 33, pseudogene Neighboring gene family with sequence similarity 95 member C Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:38568859-38569528 Neighboring gene ankyrin repeat domain 18A Neighboring gene sorting nexin 18 pseudogene 3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28417 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28418 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:38642561-38643062 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:38643063-38643562 Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta pseudogene 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:38672265-38672908 Neighboring gene RNA, U6 small nuclear 765, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Phenotypes

    EBI GWAS Catalog

    Description
    Cross-Disorder Genome-Wide Analyses Suggest a Complex Genetic Relationship Between Tourette's Syndrome and OCD.
    EBI GWAS Catalog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_027294.1 RNA Sequence

      Status: PREDICTED

      Source sequence(s)
      AL591543, BC036230, BC041970

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

      Range
      38621088..38623284
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060933.1 Alternate T2T-CHM13v2.0

      Range
      38645290..38647486
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)