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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001278642.1 → NP_001265571.1 EGF-like repeat and discoidin I-like domain-containing protein 3 isoform 2 precursor
See identical proteins and their annotated locations for NP_001265571.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an in-frame exon in the coding region, compared to variant 1. The resulting isoform (2) lacks an internal segment, compared to isoform 1.
- Source sequence(s)
-
AC093296, BC030828, BC053656, BQ101116, DB504385, ES308783
- Consensus CDS
-
CCDS64195.1
- UniProtKB/Swiss-Prot
-
O43854
- Related
- ENSP00000369483.3, ENST00000380138.3
- Conserved Domains (2) summary
-
- cd00054
Location:109 → 145
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00057
Location:150 → 303
- FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
-
NM_005711.5 → NP_005702.3 EGF-like repeat and discoidin I-like domain-containing protein 3 isoform 1 precursor
See identical proteins and their annotated locations for NP_005702.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AC026440, AC093296, BC030828, BQ101116, ES308783, U70312
- Consensus CDS
-
CCDS4062.1
- UniProtKB/Swiss-Prot
- B2R763, O43854, O43855, Q5D094, Q8N610
- Related
- ENSP00000296591.4, ENST00000296591.10
- Conserved Domains (3) summary
-
- smart00231
Location:157 → 314
- FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain
- cd00054
Location:119 → 155
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00057
Location:160 → 313
- FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000005.10 Reference GRCh38.p14 Primary Assembly
- Range
-
83940554..84384880 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060929.1 Alternate T2T-CHM13v2.0
- Range
-
84429063..84873508 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)