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    tlp-1 Zinc finger protein tlp-1 [ Caenorhabditis elegans ]

    Gene ID: 178338, updated on 2-Nov-2024

    Summary

    Official Symbol
    tlp-1
    Official Full Name
    Zinc finger protein tlp-1
    Primary source
    WormBase:WBGene00006580
    Locus tag
    CELE_T23G4.1
    See related
    AllianceGenome:WB:WBGene00006580
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable metal ion binding activity. Acts upstream of or within positive regulation of transcription by RNA polymerase II. Located in nucleus. Is expressed in several structures, including head; rectal valve cell; somatic nervous system; tail precursor cell; and tail spike. Orthologous to human ZNF503 (zinc finger protein 503) and ZNF703 (zinc finger protein 703). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See tlp-1 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    4
    Sequence:
    Chromosome: IV; NC_003282.8 (13701208..13704082, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Zinc finger protein tlp-1
    NP_502647.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      13701208..13704082 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_070246.5NP_502647.1  Zinc finger protein tlp-1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502647.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      G5EGF8