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    C06E8.5 Lipid-binding serum glycoprotein C-terminal domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 182336, updated on 2-Nov-2024

    Summary

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    Official Symbol
    C06E8.5
    Official Full Name
    Lipid-binding serum glycoprotein C-terminal domain-containing protein
    Primary source
    WormBase:WBGene00015544
    Locus tag
    CELE_C06E8.5
    See related
    AllianceGenome:WB:WBGene00015544
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable lipid binding activity. Predicted to be active in extracellular space. Orthologous to human BPIFC (BPI fold containing family C). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See C06E8.5 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    9
    Sequence:
    Chromosome: III; NC_003281.10 (7002300..7005450, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene non-specific serine/threonine protein kinase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Gamma-aminobutyric acid receptor subunit beta Neighboring gene ncRNA Neighboring gene Cuticle collagen 8

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Lipid-binding serum glycoprotein C-terminal domain-containing protein
    NP_498530.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      7002300..7005450 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_066129.6 → NP_498530.2  Lipid-binding serum glycoprotein C-terminal domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498530.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q17738
      Conserved Domains (2) summary
      smart00329
      Location:356 → 560
      BPI2; BPI/LBP/CETP C-terminal domain
      smart00328
      Location:44 → 264
      BPI1; BPI/LBP/CETP N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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