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    pud-4 Up-regulated in Daf-2 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178712, updated on 2-Nov-2024

    Summary

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    Official Symbol
    pud-4
    Official Full Name
    Up-regulated in Daf-2 domain-containing protein
    Primary source
    WormBase:WBGene00017498
    Locus tag
    CELE_F15E11.12
    See related
    AllianceGenome:WB:WBGene00017498
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in hyp7 syncytium. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See pud-4 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    2
    Sequence:
    Chromosome: V; NC_003283.11 (2326678..2327282)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Up-regulated in Daf-2 domain-containing protein Neighboring gene Up-regulated in Daf-2 domain-containing protein Neighboring gene Up-regulated in Daf-2 domain-containing protein Neighboring gene Up-regulated in Daf-2 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of PUD-1 and PUD-2, two proteins up-regulated in a long-lived daf-2 mutant. Ding YH, et al. PLoS One, 2013. PMID 23799143, Free PMC Article
    2. Transcriptome profiling of the C. elegans Rb ortholog reveals diverse developmental roles. Kirienko NV, et al. Dev Biol, 2007 May 15. PMID 17368442, Free PMC Article
    3. Transcriptional repressor and activator activities of SMA-9 contribute differentially to BMP-related signaling outputs. Liang J, et al. Dev Biol, 2007 May 15. PMID 17397820
    4. Ca(2+)/Calmodulin-binding proteins from the C. elegans proteome. Shen X, et al. Cell Calcium, 2008 May. PMID 17854888
    5. Transcriptomics of ivermectin response in Caenorhabditis elegans: Integrating abamectin quantitative trait loci and comparison to the Ivermectin-exposed DA1316 strain. Dube F, et al. PLoS One, 2023. PMID 37141255, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Up-regulated in Daf-2 domain-containing protein
    NP_001294745.1
    • Confirmed by transcript evidence
    NP_001294746.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      2326678..2327282
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001307816.3 → NP_001294745.1  Up-regulated in Daf-2 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294745.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M1ZJ62
      Conserved Domains (1) summary
      pfam18457
      Location:12 → 152
      PUD1_2; Up-Regulated in long-lived daf-2

    2. NM_001307817.4 → NP_001294746.1  Up-regulated in Daf-2 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294746.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M1ZMJ3
      Conserved Domains (1) summary
      pfam18457
      Location:12 → 138
      PUD1_2; Up-Regulated in long-lived daf-2
    Nucleotide Protein
    Heading Accession and Version

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