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    CUX1 cut like homeobox 1 [ Homo sapiens (human) ]

    Gene ID: 1523, updated on 7-Jan-2024

    Summary

    Official Symbol
    CUX1provided by HGNC
    Official Full Name
    cut like homeobox 1provided by HGNC
    Primary source
    HGNC:HGNC:2557
    See related
    Ensembl:ENSG00000257923 MIM:116896; AllianceGenome:HGNC:2557
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CDP; CUX; p75; CASP; CDP1; COY1; Clox; GDDI; p100; p110; p200; CUTL1; GOLIM6; CDP/Cut; Cux/CDP; Nbla10317
    Summary
    The protein encoded by this gene is a member of the homeodomain family of DNA binding proteins. It may regulate gene expression, morphogenesis, and differentiation and it may also play a role in the cell cycle progession. Several alternatively spliced transcript variants encoding different isoforms have been identified.[provided by RefSeq, Feb 2011]
    Expression
    Ubiquitous expression in endometrium (RPKM 11.3), thyroid (RPKM 8.5) and 25 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See CUX1 in Genome Data Viewer
    Location:
    7q22.1
    Exon count:
    34
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (101816007..102283958)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (103136249..103601363)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (101459287..101927250)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986832 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101241532-101242460 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101242461-101243388 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18486 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101257215-101258142 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101258143-101259071 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101259072-101259999 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101262113-101262652 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101262653-101263192 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101267192-101268119 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:7310423-7310940 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:7309904-7310422 Neighboring gene myosin light chain 10 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18487 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101342297-101342944 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:101349551-101349730 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101376622-101377520 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26408 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26409 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101386177-101387120 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101387749-101388269 Neighboring gene NANOG hESC enhancer GRCh37_chr7:101447145-101447694 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18489 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18490 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:101459162-101460090 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18496 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18495 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18493 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18494 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101464366-101465068 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101467637-101468199 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101475068-101475709 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26410 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101504139-101504852 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101520321-101521126 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:101526861-101527028 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26411 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18497 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101533527-101534237 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101539593-101540093 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101539092-101539592 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101543621-101544120 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101578117-101578688 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101578689-101579260 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101579261-101579832 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101579833-101580404 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101583727-101584614 Neighboring gene Sharpr-MPRA regulatory region 4286 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101585503-101586390 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr7:101595769-101596968 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101621873-101622514 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26413 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26414 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101628325-101629237 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr7:101630224-101631423 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101632213-101633022 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26417 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101641118-101641805 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101641806-101642492 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26418 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:101679949-101680151 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26419 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101707086-101707802 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:101711090-101711280 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101738967-101739478 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:101740358-101741557 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101744257-101744758 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101744759-101745258 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101745526-101746202 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101746203-101746878 Neighboring gene Sharpr-MPRA regulatory region 1808 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:101762457-101762956 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:101766794-101767020 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101768501-101769053 Neighboring gene Sharpr-MPRA regulatory region 3063 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:101793464-101793605 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101796109-101796814 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101806365-101807260 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101807261-101808154 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101812271-101812822 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101812823-101813373 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101821837-101822337 Neighboring gene small nucleolar RNA SNORA48 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr7:101841732-101842931 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26420 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18498 Neighboring gene uncharacterized LOC124901711 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:101911196-101911353 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101917405-101918238 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101922504-101923122 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101923123-101923741 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:101927516-101927700 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18499 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18500 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26422 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26423 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26421 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18501 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101937369-101938122 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:101949043-101949828 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26425 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:101951399-101952183 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101957283-101957934 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101957935-101958585 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101959159-101959659 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101960288-101961000 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:101962426-101963137 Neighboring gene uncharacterized LOC107986717 Neighboring gene microRNA 4285 Neighboring gene SH2B adaptor protein 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Phenotypes

    Associated conditions

    Description Tests
    Global developmental delay with or without impaired intellectual development
    MedGen: C5193032 OMIM: 618330 GeneReviews: Not available
    Compare labs

    EBI GWAS Catalog

    Description
    Possible association of CUX1 gene polymorphisms with antidepressant response in major depressive disorder.
    EBI GWAS Catalog

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • FLJ31745

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in positive regulation of dendrite morphogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
     
    part_of chromatin ISA
    Inferred from Sequence Alignment
    more info
     
    located_in cytosol TAS
    Traceable Author Statement
    more info
     
    located_in nucleoplasm IDA
    Inferred from Direct Assay
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    protein CASP; Homeobox protein cut-like 1
    Names
    CCAAT displacement protein
    CDP/Cux p200
    CUX1 gene Alternatively Spliced Product
    cut homolog
    golgi integral membrane protein 6
    homeobox protein cux-1
    mutant CUX1
    putative protein product of Nbla10317

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_029476.2 RefSeqGene

      Range
      5104..473055
      Download
      GenBank, FASTA, Sequence Viewer (Graphics), LRG_1123

    mRNA and Protein(s)

    1. NM_001202543.2NP_001189472.1  Homeobox protein cut-like 1 isoform d

      See identical proteins and their annotated locations for NP_001189472.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (4) encodes the longest isoform (d).
      Source sequence(s)
      AC005088, BC040199, BC066592, DC410774
      Consensus CDS
      CCDS56498.1
      UniProtKB/TrEMBL
      A0A2R8Y852
      Related
      ENSP00000353401.3, ENST00000360264.7
      Conserved Domains (5) summary
      pfam05887
      Location:13141412
      Trypan_PARP; Procyclic acidic repetitive protein (PARP)
      pfam00046
      Location:12581311
      Homeobox; Homeobox domain
      pfam00901
      Location:86361
      Orbi_VP5; Orbivirus outer capsid protein VP5
      pfam02376
      Location:11331210
      CUT; CUT domain
      pfam13851
      Location:131352
      GAS; Growth-arrest specific micro-tubule binding
    2. NM_001202544.3NP_001189473.1  protein CASP isoform e

      Status: REVIEWED

      Description
      Transcript Variant: This variant (5) lacks an in-frame exon in the 5' region and has an alternate 3' sequence including the coding region, as compared to variant 1. The resulting isoform (e) lacks an internal segment and has a shorter and distinct C-terminus, as compared to isoform d.
      Source sequence(s)
      AC091390, AK125097, BC012323, BC066592, DC410774, L12579
      Consensus CDS
      CCDS56500.1
      UniProtKB/Swiss-Prot
      P39880, Q13948
      Related
      ENSP00000449371.2, ENST00000547394.6
      Conserved Domains (3) summary
      pfam00901
      Location:70345
      Orbi_VP5; Orbivirus outer capsid protein VP5
      pfam08172
      Location:407622
      CASP_C; CASP C terminal
      pfam13851
      Location:115336
      GAS; Growth-arrest specific micro-tubule binding
    3. NM_001202545.3NP_001189474.1  protein CASP isoform f

      Status: REVIEWED

      Description
      Transcript Variant: This variant (6) lacks an in-frame exon in the 5' region and has an alternate 3' sequence including the coding region, as compared to variant 1. The resulting isoform (f) lacks an internal segment and has a shorter and distinct C-terminus, as compared to isoform d.
      Source sequence(s)
      AC091390, AK122726, BC012323, DC410774, L12579
      Consensus CDS
      CCDS56499.1
      UniProtKB/Swiss-Prot
      P39880, Q13948
      Related
      ENSP00000409745.2, ENST00000425244.6
      Conserved Domains (3) summary
      pfam07851
      Location:261336
      TMPIT; TMPIT-like protein
      pfam08172
      Location:377592
      CASP_C; CASP C terminal
      pfam15290
      Location:101240
      Syntaphilin; Golgi-localized syntaxin-1-binding clamp
    4. NM_001202546.3NP_001189475.1  protein CASP isoform g

      Status: REVIEWED

      Description
      Transcript Variant: This variant (7) lacks an in-frame exon in the 5' region and has an alternate 3' sequence including the coding region, as compared to variant 1. The resulting isoform (g) lacks an internal segment and has a shorter and distinct C-terminus, as compared to isoform d.
      Source sequence(s)
      AC005096, AC091390, AK303151, BC012323, L12579
      Consensus CDS
      CCDS59071.1
      UniProtKB/Swiss-Prot
      Q13948
      Related
      ENSP00000377410.3, ENST00000393824.7
      Conserved Domains (3) summary
      pfam00901
      Location:49322
      Orbi_VP5; Orbivirus outer capsid protein VP5
      pfam08172
      Location:384599
      CASP_C; CASP C terminal
      pfam13851
      Location:94313
      GAS; Growth-arrest specific micro-tubule binding
    5. NM_001913.5NP_001904.2  protein CASP isoform b

      See identical proteins and their annotated locations for NP_001904.2

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) has an alternate 3' sequence including the coding region, as compared to variant 4. The resulting isoform (b) has a shorter and distinct C-terminus, as compared to isoform d.
      Source sequence(s)
      AC091390, AK222832, BC012323, DC410774, L12579
      Consensus CDS
      CCDS5720.1
      UniProtKB/Swiss-Prot
      B3KWH3, B3KWH8, B4DZZ2, G3V1Z6, J3KPQ6, Q13948, Q53GU9, Q8TBS3
      Related
      ENSP00000484760.2, ENST00000622516.6
      Conserved Domains (3) summary
      pfam00901
      Location:86361
      Orbi_VP5; Orbivirus outer capsid protein VP5
      pfam08172
      Location:423638
      CASP_C; CASP C terminal
      pfam13851
      Location:131352
      GAS; Growth-arrest specific micro-tubule binding
    6. NM_181500.4NP_852477.1  protein CASP isoform c

      See identical proteins and their annotated locations for NP_852477.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (3) lacks a 6 nt segment at an alternate splice site and has an alternate 3' sequence including the coding region, as compared to variant 4. The resulting isoform (c) lacks two internal amino acids and has a shorter and distinct C-terminus, as compared to isoform d.
      Source sequence(s)
      AB075522, AC091390, BC012323, BC025422, BC066592, DC410774
      Consensus CDS
      CCDS47672.1
      UniProtKB/Swiss-Prot
      P39880, Q13948
      UniProtKB/TrEMBL
      Q3LIA3
      Related
      ENSP00000414091.5, ENST00000437600.9
      Conserved Domains (2) summary
      pfam00901
      Location:86359
      Orbi_VP5; Orbivirus outer capsid protein VP5
      pfam08172
      Location:421636
      CASP_C; CASP C terminal
    7. NM_181552.4NP_853530.2  Homeobox protein cut-like 1 isoform a

      See identical proteins and their annotated locations for NP_853530.2

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) has an alternate 5' exon, as compared to variant 4. The resulting isoform (a) has a shorter and distinct N-terminus, as compared to isoform d.
      Source sequence(s)
      AC005088, AC005096, BC040199, BC066592, M74099
      Consensus CDS
      CCDS5721.1
      UniProtKB/Swiss-Prot
      B3KV79, J3KQV9, P39880, Q6NYH4, Q75LE5, Q75MT2, Q75MT3, Q86UJ7, Q9UEV5
      UniProtKB/TrEMBL
      A0A2R8Y852
      Related
      ENSP00000292535.7, ENST00000292535.12
      Conserved Domains (5) summary
      pfam05887
      Location:13031401
      Trypan_PARP; Procyclic acidic repetitive protein (PARP)
      pfam00046
      Location:12471300
      Homeobox; Homeobox domain
      pfam00901
      Location:75350
      Orbi_VP5; Orbivirus outer capsid protein VP5
      pfam02376
      Location:11221199
      CUT; CUT domain
      pfam13851
      Location:120341
      GAS; Growth-arrest specific micro-tubule binding

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      101816007..102283958
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047419908.1XP_047275864.1  Homeobox protein cut-like 1 isoform X5

      UniProtKB/TrEMBL
      A0A2R8Y852
    2. XM_047419912.1XP_047275868.1  Homeobox protein cut-like 1 isoform X10

      UniProtKB/TrEMBL
      A0A2R8Y852
      Related
      ENSP00000496653.1, ENST00000645010.1
    3. XM_047419913.1XP_047275869.1  Homeobox protein cut-like 1 isoform X11

      UniProtKB/TrEMBL
      A0A2R8Y852
    4. XM_011515825.3XP_011514127.1  Homeobox protein cut-like 1 isoform X13

      UniProtKB/TrEMBL
      A0A2R8YDI1
      Conserved Domains (5) summary
      PHA03247
      Location:656842
      PHA03247; large tegument protein UL36; Provisional
      PHA03307
      Location:12231296
      PHA03307; transcriptional regulator ICP4; Provisional
      TIGR02169
      Location:18368
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      pfam00046
      Location:11561210
      Homeobox; Homeobox domain
      pfam02376
      Location:10311104
      CUT; CUT domain
    5. XM_047419914.1XP_047275870.1  Homeobox protein cut-like 1 isoform X14

      UniProtKB/TrEMBL
      A0A2R8YDI1
    6. XM_047419916.1XP_047275872.1  Homeobox protein cut-like 1 isoform X16

      UniProtKB/TrEMBL
      A0A2R8YDI1
      Related
      ENSP00000494610.1, ENST00000646649.1
    7. XM_047419917.1XP_047275873.1  Homeobox protein cut-like 1 isoform X17

      UniProtKB/TrEMBL
      A0A2R8YDI1
    8. XM_047419909.1XP_047275865.1  Homeobox protein cut-like 1 isoform X6

      UniProtKB/TrEMBL
      A0A2R8Y852
    9. XM_047419910.1XP_047275866.1  Homeobox protein cut-like 1 isoform X7

      UniProtKB/TrEMBL
      A0A2R8Y852
    10. XM_017011760.3XP_016867249.1  Homeobox protein cut-like 1 isoform X12

      UniProtKB/TrEMBL
      A0A2R8Y852
      Conserved Domains (5) summary
      PHA03247
      Location:734920
      PHA03247; large tegument protein UL36; Provisional
      PHA03307
      Location:13011374
      PHA03307; transcriptional regulator ICP4; Provisional
      TIGR02168
      Location:18362
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam00046
      Location:12341288
      Homeobox; Homeobox domain
      pfam02376
      Location:11091182
      CUT; CUT domain
    11. XM_047419915.1XP_047275871.1  Homeobox protein cut-like 1 isoform X15

      UniProtKB/TrEMBL
      A0A2R8YDI1
    12. XM_005250154.4XP_005250211.2  protein CASP isoform X18

      Related
      ENST00000560541.5
    13. XM_005250150.4XP_005250207.2  Homeobox protein cut-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A2R8Y852
    14. XM_006715854.3XP_006715917.2  Homeobox protein cut-like 1 isoform X4

      UniProtKB/TrEMBL
      A0A2R8Y852
      Related
      ENSP00000446630.2, ENST00000549414.6
    15. XM_047419906.1XP_047275862.1  Homeobox protein cut-like 1 isoform X2

      UniProtKB/TrEMBL
      A0A2R8Y852
    16. XM_047419907.1XP_047275863.1  Homeobox protein cut-like 1 isoform X3

      UniProtKB/TrEMBL
      A0A2R8Y852
    17. XM_024446668.2XP_024302436.2  Homeobox protein cut-like 1 isoform X8

      UniProtKB/TrEMBL
      A0A2R8YDI1
    18. XM_047419911.1XP_047275867.1  Homeobox protein cut-like 1 isoform X9

      UniProtKB/TrEMBL
      A0A2R8YDI1

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      103136249..103601363
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054357305.1XP_054213280.1  Homeobox protein cut-like 1 isoform X5

      UniProtKB/TrEMBL
      A0A2R8Y852
    2. XM_054357310.1XP_054213285.1  Homeobox protein cut-like 1 isoform X10

      UniProtKB/TrEMBL
      A0A2R8Y852
    3. XM_054357311.1XP_054213286.1  Homeobox protein cut-like 1 isoform X11

      UniProtKB/TrEMBL
      A0A2R8Y852
    4. XM_054357313.1XP_054213288.1  Homeobox protein cut-like 1 isoform X13

      UniProtKB/TrEMBL
      A0A2R8YDI1
    5. XM_054357314.1XP_054213289.1  Homeobox protein cut-like 1 isoform X14

      UniProtKB/TrEMBL
      A0A2R8YDI1
    6. XM_054357316.1XP_054213291.1  Homeobox protein cut-like 1 isoform X16

      UniProtKB/TrEMBL
      A0A2R8YDI1
    7. XM_054357317.1XP_054213292.1  Homeobox protein cut-like 1 isoform X17

      UniProtKB/TrEMBL
      A0A2R8YDI1
    8. XM_054357306.1XP_054213281.1  Homeobox protein cut-like 1 isoform X6

      UniProtKB/TrEMBL
      A0A2R8Y852
    9. XM_054357307.1XP_054213282.1  Homeobox protein cut-like 1 isoform X7

      UniProtKB/TrEMBL
      A0A2R8Y852
    10. XM_054357312.1XP_054213287.1  Homeobox protein cut-like 1 isoform X12

      UniProtKB/TrEMBL
      A0A2R8Y852
    11. XM_054357315.1XP_054213290.1  Homeobox protein cut-like 1 isoform X15

      UniProtKB/TrEMBL
      A0A2R8YDI1
    12. XM_054357318.1XP_054213293.1  protein CASP isoform X18

    13. XM_054357301.1XP_054213276.1  Homeobox protein cut-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A2R8Y852
    14. XM_054357304.1XP_054213279.1  Homeobox protein cut-like 1 isoform X4

      UniProtKB/TrEMBL
      A0A2R8Y852
    15. XM_054357302.1XP_054213277.1  Homeobox protein cut-like 1 isoform X2

      UniProtKB/TrEMBL
      A0A2R8Y852
    16. XM_054357303.1XP_054213278.1  Homeobox protein cut-like 1 isoform X3

      UniProtKB/TrEMBL
      A0A2R8Y852
    17. XM_054357308.1XP_054213283.1  Homeobox protein cut-like 1 isoform X8

      UniProtKB/TrEMBL
      A0A2R8YDI1
    18. XM_054357309.1XP_054213284.1  Homeobox protein cut-like 1 isoform X9

      UniProtKB/TrEMBL
      A0A2R8YDI1