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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_050626.2 RefSeqGene
- Range
-
5000..63247
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_005560.6 → NP_005551.3 laminin subunit alpha-5 precursor
See identical proteins and their annotated locations for NP_005551.3
Status: REVIEWED
- Source sequence(s)
-
AL354836
- Consensus CDS
-
CCDS33502.1
- UniProtKB/Swiss-Prot
- O15230, Q5U4N9, Q8TDF8, Q8WZA7, Q9H1P1
- Related
- ENSP00000252999.3, ENST00000252999.7
- Conserved Domains (11) summary
-
- smart00180
Location:2023 → 2067
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00282
Location:2781 → 2908
- LamG; Laminin G domain
- cd00055
Location:540 → 583
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:3340 → 3497
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- pfam00052
Location:1693 → 1818
- Laminin_B; Laminin B (Domain IV)
- pfam00053
Location:1577 → 1625
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:54 → 298
- Laminin_N; Laminin N-terminal (Domain VI)
- pfam04012
Location:2435 → 2695
- PspA_IM30; PspA/IM30 family
- pfam06008
Location:2188 → 2450
- Laminin_I; Laminin Domain I
- pfam06009
Location:2641 → 2762
- Laminin_II; Laminin Domain II
- cd16172
Location:2287 → 2578
- TorS_sensor_domain; sensor domain of the sensor histidine kinase TorS
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000020.11 Reference GRCh38.p14 Primary Assembly
- Range
-
62309065..62367312 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047440149.1 → XP_047296105.1 laminin subunit alpha-5 isoform X5
-
XM_011528819.3 → XP_011527121.1 laminin subunit alpha-5 isoform X4
- Conserved Domains (11) summary
-
- smart00180
Location:1932 → 1976
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00282
Location:2690 → 2817
- LamG; Laminin G domain
- cd00055
Location:540 → 583
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:3254 → 3411
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- pfam00052
Location:1602 → 1727
- Laminin_B; Laminin B (Domain IV)
- pfam00053
Location:1486 → 1534
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:54 → 298
- Laminin_N; Laminin N-terminal (Domain VI)
- pfam04012
Location:2344 → 2604
- PspA_IM30; PspA/IM30 family
- pfam06008
Location:2097 → 2359
- Laminin_I; Laminin Domain I
- pfam06009
Location:2550 → 2671
- Laminin_II; Laminin Domain II
- cd16172
Location:2196 → 2487
- TorS_sensor_domain; sensor domain of the sensor histidine kinase TorS
-
XM_047440148.1 → XP_047296104.1 laminin subunit alpha-5 isoform X3
-
XM_011528818.3 → XP_011527120.1 laminin subunit alpha-5 isoform X2
- Conserved Domains (11) summary
-
- smart00180
Location:1977 → 2021
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00282
Location:2735 → 2862
- LamG; Laminin G domain
- cd00055
Location:540 → 583
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:3299 → 3456
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- pfam00052
Location:1647 → 1772
- Laminin_B; Laminin B (Domain IV)
- pfam00053
Location:1531 → 1579
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:54 → 298
- Laminin_N; Laminin N-terminal (Domain VI)
- pfam04012
Location:2389 → 2649
- PspA_IM30; PspA/IM30 family
- pfam06008
Location:2142 → 2404
- Laminin_I; Laminin Domain I
- pfam06009
Location:2595 → 2716
- Laminin_II; Laminin Domain II
- cd16172
Location:2241 → 2532
- TorS_sensor_domain; sensor domain of the sensor histidine kinase TorS
-
XM_006723796.4 → XP_006723859.1 laminin subunit alpha-5 isoform X1
- Conserved Domains (11) summary
-
- smart00180
Location:2023 → 2067
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00282
Location:2781 → 2908
- LamG; Laminin G domain
- cd00055
Location:540 → 583
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:3345 → 3502
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- pfam00052
Location:1693 → 1818
- Laminin_B; Laminin B (Domain IV)
- pfam00053
Location:1577 → 1625
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:54 → 298
- Laminin_N; Laminin N-terminal (Domain VI)
- pfam04012
Location:2435 → 2695
- PspA_IM30; PspA/IM30 family
- pfam06008
Location:2188 → 2450
- Laminin_I; Laminin Domain I
- pfam06009
Location:2641 → 2762
- Laminin_II; Laminin Domain II
- cd16172
Location:2287 → 2578
- TorS_sensor_domain; sensor domain of the sensor histidine kinase TorS
-
XM_047440150.1 → XP_047296106.1 laminin subunit alpha-5 isoform X6
-
XM_006723798.4 → XP_006723861.1 laminin subunit alpha-5 isoform X7
- Conserved Domains (6) summary
-
- smart00180
Location:2023 → 2065
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:540 → 583
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00052
Location:1693 → 1818
- Laminin_B; Laminin B (Domain IV)
- pfam00053
Location:1577 → 1625
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:54 → 298
- Laminin_N; Laminin N-terminal (Domain VI)
- cl21504
Location:2117 → 2145
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
Alternate T2T-CHM13v2.0
Genomic
-
NC_060944.1 Alternate T2T-CHM13v2.0
- Range
-
64100010..64163029 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054323446.1 → XP_054179421.1 laminin subunit alpha-5 isoform X5
-
XM_054323445.1 → XP_054179420.1 laminin subunit alpha-5 isoform X4
-
XM_054323444.1 → XP_054179419.1 laminin subunit alpha-5 isoform X3
-
XM_054323443.1 → XP_054179418.1 laminin subunit alpha-5 isoform X2
-
XM_054323442.1 → XP_054179417.1 laminin subunit alpha-5 isoform X1
-
XM_054323448.1 → XP_054179423.1 laminin subunit alpha-5 isoform X8
-
XM_054323447.1 → XP_054179422.1 laminin subunit alpha-5 isoform X6
-
XM_054323449.1 → XP_054179424.1 laminin subunit alpha-5 isoform X7