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    NR0B1 nuclear receptor subfamily 0 group B member 1 [ Homo sapiens (human) ]

    Gene ID: 190, updated on 5-Mar-2024

    Summary

    Official Symbol
    NR0B1provided by HGNC
    Official Full Name
    nuclear receptor subfamily 0 group B member 1provided by HGNC
    Primary source
    HGNC:HGNC:7960
    See related
    Ensembl:ENSG00000169297 MIM:300473; AllianceGenome:HGNC:7960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    AHC; AHX; DSS; GTD; HHG; AHCH; DAX1; DAX-1; NROB1; SRXY2
    Summary
    This gene encodes a protein that contains a DNA-binding domain. The encoded protein acts as a dominant-negative regulator of transcription which is mediated by the retinoic acid receptor. This protein also functions as an anti-testis gene by acting antagonistically to Sry. Mutations in this gene result in both X-linked congenital adrenal hypoplasia and hypogonadotropic hypogonadism. [provided by RefSeq, Jul 2008]
    Expression
    Biased expression in testis (RPKM 9.2), adrenal (RPKM 6.6) and 1 other tissue See more
    Orthologs
    NEW
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    Genomic context

    Location:
    Xp21.2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (30304206..30309390, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (29896466..29901652, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (30322323..30327507, complement)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene ReSE screen-validated silencer GRCh37_chrX:30274564-30274739 Neighboring gene MAGE family member B4 Neighboring gene MAGE family member B1 Neighboring gene ReSE screen-validated silencer GRCh37_chrX:30300409-30300510 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chrX:30301194-30302393 Neighboring gene CRISPRi-validated cis-regulatory element chrX.505 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:30326716-30327216 Neighboring gene NR0B1 5' regulatory region Neighboring gene phospholipase C epsilon 1 pseudogene 1 Neighboring gene NANOG hESC enhancer GRCh37_chrX:30472541-30473099 Neighboring gene NANOG hESC enhancer GRCh37_chrX:30517192-30517733 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29508 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20724 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29509 Neighboring gene TLR adaptor interacting with endolysosomal SLC15A4 Neighboring gene CDC28 protein kinase regulatory subunit 1B pseudogene 6

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Phenotypes

    Associated conditions

    Description Tests
    46,XY sex reversal 2
    MedGen: C1848296 OMIM: 300018 GeneReviews: Not available
    Compare labs
    Congenital adrenal hypoplasia, X-linked Compare labs

    Copy number response

    Description
    Copy number response
    Triplosensitivity

    No evidence available (Last evaluated 2020-05-05)

    ClinGen Genome Curation Page
    Haploinsufficency

    Sufficient evidence for dosage pathogenicity (Last evaluated 2020-05-05)

    ClinGen Genome Curation PagePubMed

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables DNA hairpin binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables RNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables RNA polymerase II-specific DNA-binding transcription factor binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables nuclear receptor binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein domain specific binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein homodimerization activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables transcription corepressor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables transcription corepressor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables transcription factor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in Leydig cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in Sertoli cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in adrenal gland development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in adrenal gland development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in endodermal cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in gonad development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in hypothalamus development NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in male gonad development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in male gonad development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in male sex determination IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of DNA-binding transcription factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of DNA-binding transcription factor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of DNA-templated transcription IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of DNA-templated transcription IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of intracellular steroid hormone receptor signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of negative regulation of steroid biosynthetic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in pituitary gland development NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in protein localization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in response to immobilization stress IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in spermatogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in centriolar satellite IDA
    Inferred from Direct Assay
    more info
     
    part_of chromatin ISA
    Inferred from Sequence Alignment
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in intracellular membrane-bounded organelle IDA
    Inferred from Direct Assay
    more info
     
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nuclear speck IDA
    Inferred from Direct Assay
    more info
     
    located_in nucleoplasm IDA
    Inferred from Direct Assay
    more info
     
    located_in nucleoplasm TAS
    Traceable Author Statement
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in ribosome IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    nuclear receptor subfamily 0 group B member 1
    Names
    DSS-AHC critical region on the X chromosome protein 1
    nuclear hormone receptor
    nuclear receptor DAX-1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_009814.1 RefSeqGene

      Range
      4989..10173
      Download
      GenBank, FASTA, Sequence Viewer (Graphics), LRG_858

    mRNA and Protein(s)

    1. NM_000475.5 → NP_000466.2  nuclear receptor subfamily 0 group B member 1

      See identical proteins and their annotated locations for NP_000466.2

      Status: REVIEWED

      Source sequence(s)
      AC005185, AC005926, AW612655, BC011564, BI772108
      Consensus CDS
      CCDS14223.1
      UniProtKB/Swiss-Prot
      P51843, Q96F69
      UniProtKB/TrEMBL
      F1D8P4
      Related
      ENSP00000368253.4, ENST00000378970.5
      Conserved Domains (2) summary
      cd07350
      Location:231 → 464
      NR_LBD_Dax1; The ligand binding domain of DAX1 protein, a nuclear receptor lacking DNA binding domain
      pfam14046
      Location:201 → 246
      NR_Repeat; Nuclear receptor repeat

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      30304206..30309390 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      29896466..29901652 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)