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    OGN osteoglycin [ Coturnix japonica (Japanese quail) ]

    Gene ID: 107319663, updated on 14-Mar-2024

    Summary

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    Gene symbol
    OGN
    Gene description
    osteoglycin
    See related
    Ensembl:ENSCJPG00005012247
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Coturnix japonica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
    Also known as
    Mimecan
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See OGN in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current Coturnix japonica 2.1 (GCF_001577835.2) 12 NC_029527.1 (2171060..2179288)

    Chromosome 12 - NC_029527.1Genomic Context describing neighboring genes Neighboring gene centromere protein P Neighboring gene asporin Neighboring gene osteomodulin Neighboring gene nucleolar protein 8 Neighboring gene small nucleolar RNA SNORA84 Neighboring gene isoleucyl-tRNA synthetase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029527.1 Chromosome 12 Reference Coturnix japonica 2.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular cloning and relative tissue expression of keratocan and mimecan in embryonic quail cornea. Corpuz LM, et al. Matrix Biol, 2000 Dec. PMID 11102758
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mimecan
    Names
    keratan sulfate proteoglycan mimecan

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001323222.1 → NP_001310151.1  mimecan precursor

      Status: PROVISIONAL

      Source sequence(s)
      AF128224
      UniProtKB/Swiss-Prot
      Q9DE65
      UniProtKB/TrEMBL
      A0A8C2TJZ4
      Related
      ENSCJPP00005014702.1, ENSCJPT00005020882.1
      Conserved Domains (4) summary
      sd00031
      Location:118 → 139
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:262 → 286
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:208 → 246
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:182 → 241
      LRR_8; Leucine rich repeat

    RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Coturnix japonica 2.1 Primary Assembly

    Genomic

    1. NC_029527.1 Reference Coturnix japonica 2.1 Primary Assembly

      Range
      2171060..2179288
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9DE65.1 GenPept UniProtKB/Swiss-Prot:Q9DE65

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