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    Sry3C sex-determining region Y protein 3C [ Rattus norvegicus (Norway rat) ]

    Gene ID: 120099582, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Sry3Cprovided by RGD
    Official Full Name
    sex-determining region Y protein 3Cprovided by RGD
    Primary source
    RGD:41131603
    See related
    EnsemblRapid:ENSRNOG00000079797 AllianceGenome:RGD:41131603
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Sry1; Sry3
    Summary
    Predicted to enable DNA binding activity. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See Sry3C in Genome Data Viewer
    Location:
    chromosome: Y
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) Y NC_086040.1 (400873..401382)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) Y NC_051357.1 (377131..377640)

    Chromosome Y - NC_086040.1Genomic Context describing neighboring genes Neighboring gene sex-determining region Y protein 4 Neighboring gene H/ACA ribonucleoprotein complex subunit DKC1-like Neighboring gene myosin regulatory light chain 12B pseudogene Neighboring gene lysine demethylase 5D like 1 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptional analysis of the multiple Sry genes and developmental program at the onset of testis differentiation in the rat. Prokop JW, et al. Biol Sex Differ, 2020 May 12. PMID 32398044, Free PMC Article
    2. Analysis of Sry duplications on the Rattus norvegicus Y-chromosome. Prokop JW, et al. BMC Genomics, 2013 Nov 14. PMID 24228692, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    sex-determining region Y protein-like
    Names
    HMG box transcription factor Sry3C
    sex-determining region Y Sry1 protein
    sex-determining region Y Sry3 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001416757.1 → NP_001403686.1  sex-determining region Y protein-like

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000022
      UniProtKB/TrEMBL
      Q9ERV4
      Related
      ENSRNOP00000106814.1, ENSRNOT00000130570.1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086040.1 Reference GRCr8

      Range
      400873..401382
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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