U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    AT1G02160 Cox19 family protein (CHCH motif) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839554, updated on 7-Sep-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    AT1G02160
    Gene description
    Cox19 family protein (CHCH motif)
    Primary source
    Araport:AT1G02160
    Locus tag
    AT1G02160
    See related
    TAIR:AT1G02160
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T6A9.18
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See AT1G02160 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (410744..411632)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene homolog of asparagine-linked glycosylation 12 Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene metacaspase 1 Neighboring gene ferredoxin-like protein Neighboring gene Fatty acid hydroxylase superfamily

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    NM_001083980.2
    NM_100096.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Cox19 family protein (CHCH motif)
    NP_001077449.1
    • Cox19 family protein (CHCH motif); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MTCP1 (InterPro:IPR009069), CHCH (InterPro:IPR010625); Has 36 Blast hits to 36 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 19; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_171718.1
    • Cox19 family protein (CHCH motif); CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); Has 56 Blast hits to 56 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 34; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      410744..411632
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100096.4 → NP_171718.1  Cox19 family protein (CHCH motif) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171718.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654E7G7, Q8VZ44
      Conserved Domains (1) summary
      pfam06747
      Location:21 → 55
      CHCH; CHCH domain

    2. NM_001083980.2 → NP_001077449.1  Cox19 family protein (CHCH motif) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077449.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8MQS6
      Conserved Domains (1) summary
      pfam06747
      Location:21 → 55
      CHCH; CHCH domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools