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    SAICODRAFT_98324 BOP1NT-domain-containing protein [ Saitoella complicata NRRL Y-17804 ]

    Gene ID: 30189002, updated on 14-Dec-2023

    Summary

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    Gene symbol
    SAICODRAFT_98324
    Gene description
    BOP1NT-domain-containing protein
    Locus tag
    SAICODRAFT_98324
    Gene type
    protein coding
    RNA name
    BOP1NT-domain-containing protein
    RefSeq status
    PROVISIONAL
    Organism
    Saitoella complicata NRRL Y-17804 (strain: NRRL Y-17804, type-material: culture from type material of Saitoella complicata)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Taphrinomycotina incertae sedis; Saitoella
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    Genomic context

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    See SAICODRAFT_98324 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_017567023.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene nucleoside hydrolase Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_017567023.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomics of biotechnologically important yeasts. Riley R, et al. Proc Natl Acad Sci U S A, 2016 Aug 30. PMID 27535936, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribonucleoprotein complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of PeBoW complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of preribosome, large subunit precursor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BOP1NT-domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_017567023.1 Reference assembly

      Range
      103287..105592 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019172155.1 → XP_019020834.1  BOP1NT-domain-containing protein [Saitoella complicata NRRL Y-17804]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0E9NQQ1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    ODQ49721.1

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