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    LOC101155269 neuritin [ Oryzias latipes (Japanese medaka) ]

    Gene ID: 101155269, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC101155269
    Gene description
    neuritin
    See related
    EnsemblRapid:ENSORLG00000015615
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryzias latipes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
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    Genomic context

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    See LOC101155269 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current ASM223467v1 (GCF_002234675.1) 5 NC_019863.2 (27774739..27776890, complement)
    102 previous assembly ASM31367v1 (GCF_000313675.1) 5 NC_019863.1 (29520395..29522546, complement)

    Chromosome 5 - NC_019863.2Genomic Context describing neighboring genes Neighboring gene protein S100-B Neighboring gene bile acid-CoA:amino acid N-acyltransferase Neighboring gene SYS1 golgi trafficking protein Neighboring gene translocon-associated protein subunit alpha Neighboring gene uncharacterized LOC101155763

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron projection extension IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    neuritin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM223467v1 Primary Assembly

    Genomic

    1. NC_019863.2 Reference ASM223467v1 Primary Assembly

      Range
      27774739..27776890 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004069136.3 → XP_004069184.1  neuritin

      UniProtKB/TrEMBL
      A0A3P9HRY8, H2MLG9
      Related
      ENSORLP00000019547.2, ENSORLT00000019548.3
      Conserved Domains (1) summary
      pfam15056
      Location:80 → 166
      NRN1; Neuritin protein family
    Nucleotide Protein
    Heading Accession and Version

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