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    LOC100191728 DELLA protein DWARF8 [ Zea mays ]

    Gene ID: 100191728, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC100191728
    Gene description
    DELLA protein DWARF8
    Locus tag
    ZEAMMB73_Zm00001d033680
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    D8; DWARF8; GRMZM2G144744
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 1 NC_050096.1 (272695335..272697912)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 1 NC_024459.2 (270917959..270920536)

    Chromosome 1 - NC_050096.1Genomic Context describing neighboring genes Neighboring gene protein binding protein Neighboring gene integral membrane protein DUF6 containing protein Neighboring gene uncharacterized LOC109943785 Neighboring gene coatomer subunit gamma-2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Validation of Dwarf8 polymorphisms associated with flowering time in elite European inbred lines of maize (Zea mays L.). Andersen JR, et al. Theor Appl Genet, 2005 Jul. PMID 15933874
    2. Dwarf8 polymorphisms associate with variation in flowering time. Thornsberry JM, et al. Nat Genet, 2001 Jul. PMID 11431702
    3. Patterns of molecular evolution associated with two selective sweeps in the Tb1-Dwarf8 region in maize. Camus-Kulandaivelu L, et al. Genetics, 2008 Oct. PMID 18780751, Free PMC Article
    4. Structure of linkage disequilibrium and phenotypic associations in the maize genome. Remington DL, et al. Proc Natl Acad Sci U S A, 2001 Sep 25. PMID 11562485, Free PMC Article
    5. 'Green revolution' genes encode mutant gibberellin response modulators. Peng J, et al. Nature, 1999 Jul 15. PMID 10421366

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. the polymorphism pattern is consistent with two interfering selective sweeps at D8.
      Title: Patterns of molecular evolution associated with two selective sweeps in the Tb1-Dwarf8 region in maize.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DELLA protein DWARF8
    Names
    Protein dwarf-8
    dwarf plant8
    gibberelin response modulator dwarf 8
    gibberellin response modulator

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001367464.1 → NP_001354393.1  DELLA protein DWARF8

      Status: VALIDATED

      Source sequence(s)
      BT054262
      UniProtKB/Swiss-Prot
      Q93V57, Q93VT0, Q93VT1, Q93VT2, Q93WG1, Q93WI7, Q945I5, Q945I6, Q945I7, Q945I8, Q945I9, Q945J0, Q945J1, Q945J2, Q945J3, Q945J4, Q945J5, Q945J6, Q9ST48
      UniProtKB/TrEMBL
      A0A317YC32, A0A804M2M0, A0A8J8Y337, B7ZY70

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050096.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      272695335..272697912
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001137157.2: Suppressed sequence

      Description
      NM_001137157.2: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ST48.1 GenPept UniProtKB/Swiss-Prot:Q9ST48

    Gene LinkOut

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