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    eef1g eukaryotic translation elongation factor 1 gamma [ Oreochromis niloticus (Nile tilapia) ]

    Gene ID: 100709421, updated on 8-Mar-2024

    Summary

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    Gene symbol
    eef1g
    Gene description
    eukaryotic translation elongation factor 1 gamma
    See related
    Ensembl:ENSONIG00000005190
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oreochromis niloticus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
    Orthologs
    human zebrafish all
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    Genomic context

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    See eef1g in Genome Data Viewer
    Location:
    chromosome: LG2
    Exon count:
    10
    Annotation release Status Assembly LG Location
    104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG2 NC_031966.2 (22174657..22181387, complement)
    103 previous assembly ASM185804v2 (GCF_001858045.1) LG2 NC_031966.1 (20257840..20264539, complement)

    Linkage Group LG2 - NC_031966.2Genomic Context describing neighboring genes Neighboring gene zinc finger BED domain-containing protein 1-like Neighboring gene AHNAK nucleoprotein Neighboring gene uncharacterized LOC100697146 Neighboring gene RNA polymerase II subunit G Neighboring gene neuronal acetylcholine receptor subunit alpha-7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables translation elongation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translational elongation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    elongation factor 1-gamma

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference O_niloticus_UMD_NMBU Primary Assembly

    Genomic

    1. NC_031966.2 Reference O_niloticus_UMD_NMBU Primary Assembly

      Range
      22174657..22181387 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003444588.3 → XP_003444636.1  elongation factor 1-gamma

      UniProtKB/TrEMBL
      A0A669DB39
      Related
      ENSONIP00000006521.1, ENSONIT00000006526.2
      Conserved Domains (4) summary
      cd03181
      Location:91 → 213
      GST_C_EF1Bgamma_like; Glutathione S-transferase C-terminal-like, alpha helical domain of the Gamma subunit of Elongation Factor 1B and similar proteins
      COG0625
      Location:39 → 203
      GstA; Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
      cd03044
      Location:4 → 82
      GST_N_EF1Bgamma; GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of ...
      pfam00647
      Location:279 → 385
      EF1G; Elongation factor 1 gamma, conserved domain
    Nucleotide Protein
    Heading Accession and Version

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