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    LOC119053583 long-wave-sensitive opsin 1 [ Artibeus jamaicensis (Jamaican fruit-eating bat) ]

    Gene ID: 119053583, updated on 30-Mar-2024

    Summary

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    Gene symbol
    LOC119053583
    Gene description
    long-wave-sensitive opsin 1
    See related
    EnsemblRapid:ENSAJMG00005021552
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Artibeus jamaicensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Artibeus
    Also known as
    OPN1LW; OPN1MW3
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    Genomic context

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    See LOC119053583 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_03 current CSHL_Jam_final (GCF_021234435.1) Unplaced Scaffold NW_026521282.1 (506734..518198, complement)

    NW_026521282.1Genomic Context describing neighboring genes Neighboring gene transketolase like 1 Neighboring gene testis expressed 28 Neighboring gene reticulon-3-like Neighboring gene methyl-CpG binding protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026521282 Unplaced Scaffold Reference CSHL_Jam_final Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multifactorial processes underlie parallel opsin loss in neotropical bats. Sadier A, et al. Elife, 2018 Dec 18. PMID 30560780, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phototransduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in visual perception IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in photoreceptor outer segment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    long-wave-sensitive opsin 1
    Names
    long-wavelength sensitive opsin
    opsin 1, medium wave sensitive 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_021234435.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CSHL_Jam_final Primary Assembly

    Genomic

    1. NW_026521282.1 Reference CSHL_Jam_final Primary Assembly

      Range
      506734..518198 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037151228.2 → XP_037007123.2  long-wave-sensitive opsin 1

      UniProtKB/TrEMBL
      A0A3Q9NFM5
    Nucleotide Protein
    Heading Accession and Version

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