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    HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 [ Neopelma chrysocephalum (saffron-crested tyrant-manakin) ]

    Gene ID: 113972206, updated on 3-Aug-2024

    Summary

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    Gene symbol
    HNRNPH3
    Gene description
    heterogeneous nuclear ribonucleoprotein H3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Neopelma chrysocephalum
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Neopelma
    Orthologs
    human mouse all
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    Genomic context

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    See HNRNPH3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current ASM398488v2 (GCF_003984885.1) Unplaced Scaffold NW_020897751.1 (4169652..4176683, complement)

    NW_020897751.1Genomic Context describing neighboring genes Neighboring gene tet methylcytosine dioxygenase 1 Neighboring gene solute carrier family 25 member 16 Neighboring gene DNA replication helicase/nuclease 2 Neighboring gene RUN and FYVE domain containing 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020897751 Unplaced Scaffold Reference ASM398488v2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heterogeneous nuclear ribonucleoprotein H3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Neopelma chrysocephalum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM398488v2

    Genomic

    1. NW_020897751.1 Reference ASM398488v2

      Range
      4169652..4176683 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027693052.1 → XP_027548853.1  heterogeneous nuclear ribonucleoprotein H3 isoform X4

      Conserved Domains (2) summary
      cd12735
      Location:202 → 276
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily

    2. XM_027693055.1 → XP_027548856.1  heterogeneous nuclear ribonucleoprotein H3 isoform X7

      Conserved Domains (2) summary
      cd12735
      Location:183 → 257
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily

    3. XM_027693054.1 → XP_027548855.1  heterogeneous nuclear ribonucleoprotein H3 isoform X6

      Conserved Domains (2) summary
      cd12735
      Location:198 → 272
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily

    4. XM_027693057.1 → XP_027548858.1  heterogeneous nuclear ribonucleoprotein H3 isoform X8

      Conserved Domains (2) summary
      cd12735
      Location:202 → 276
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily

    5. XM_027693058.1 → XP_027548859.1  heterogeneous nuclear ribonucleoprotein H3 isoform X9

      Conserved Domains (2) summary
      cd12735
      Location:198 → 272
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily

    6. XM_027693051.1 → XP_027548852.1  heterogeneous nuclear ribonucleoprotein H3 isoform X3

    7. XM_027693048.1 → XP_027548849.1  heterogeneous nuclear ribonucleoprotein H3 isoform X1

    8. XM_027693053.1 → XP_027548854.1  heterogeneous nuclear ribonucleoprotein H3 isoform X5

    9. XM_027693049.1 → XP_027548850.1  heterogeneous nuclear ribonucleoprotein H3 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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