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    LOC114574093 zinc finger protein 239-like [ Perca flavescens (yellow perch) ]

    Gene ID: 114574093, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC114574093
    Gene description
    zinc finger protein 239-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Perca flavescens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
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    Genomic context

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    See LOC114574093 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current PFLA_1.0 (GCF_004354835.1) 19 NC_041349.1 (2547026..2598735)

    Chromosome 19 - NC_041349.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 239-like Neighboring gene gap junction delta-3 protein-like Neighboring gene putative zinc finger protein 702 Neighboring gene zinc finger protein 271-like Neighboring gene uncharacterized LOC114574039 Neighboring gene zinc finger protein 239-like Neighboring gene zinc finger protein 239-like Neighboring gene zinc finger protein 501-like Neighboring gene zinc finger protein 239-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041349.1 Chromosome 19 Reference PFLA_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 239-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PFLA_1.0 Primary Assembly

    Genomic

    1. NC_041349.1 Reference PFLA_1.0 Primary Assembly

      Range
      2547026..2598735
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028606410.1 → XP_028462211.1  zinc finger protein 239-like

      Conserved Domains (2) summary
      COG5048
      Location:182 → 259
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:186 → 206
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_028606409.1 → XP_028462210.1  zinc finger protein 239-like

      Conserved Domains (2) summary
      COG5048
      Location:182 → 259
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:186 → 206
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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