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    trappc8 trafficking protein particle complex subunit 8 [ Denticeps clupeoides (denticle herring) ]

    Gene ID: 114769004, updated on 15-Mar-2024

    Summary

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    Gene symbol
    trappc8
    Gene description
    trafficking protein particle complex subunit 8
    See related
    Ensembl:ENSDCDG00000030872
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Denticeps clupeoides
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Denticipitoidei; Denticipitidae; Denticeps
    Orthologs
    human zebrafish all
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    Genomic context

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    See trappc8 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    100 current fDenClu1.1 (GCF_900700375.1) 19 NC_041725.1 (19568464..19585326)

    Chromosome 19 - NC_041725.1Genomic Context describing neighboring genes Neighboring gene MCM3 minichromosome maintenance deficient 3 (S. cerevisiae), like Neighboring gene meprin A subunit beta a Neighboring gene E3 ubiquitin-protein ligase RNF138-like Neighboring gene opsin 7, group member a Neighboring gene UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041725.1 Chromosome 19 Reference fDenClu1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to phagophore assembly site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of TRAPPIII protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in phagophore assembly site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: trafficking protein particle complex subunit 8
    Names
    trafficking protein particle complex 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Denticeps clupeoides Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fDenClu1.1

    Genomic

    1. NC_041725.1 Reference fDenClu1.1

      Range
      19568464..19585326
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028961652.1 → XP_028817485.1  LOW QUALITY PROTEIN: trafficking protein particle complex subunit 8

      UniProtKB/TrEMBL
      A0A8C4CFX3
      Related
      ENSDCDP00000051060.1, ENSDCDT00000062776.1
      Conserved Domains (1) summary
      pfam12739
      Location:159 → 604
      TRAPPC-Trs85; ER-Golgi trafficking TRAPP I complex 85 kDa subunit
    Nucleotide Protein
    Heading Accession and Version

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