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    fchsd2 FCH and double SH3 domains 2 [ Denticeps clupeoides (denticle herring) ]

    Gene ID: 114769212, updated on 21-Dec-2023

    Summary

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    Gene symbol
    fchsd2
    Gene description
    FCH and double SH3 domains 2
    See related
    Ensembl:ENSDCDG00000030668
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Denticeps clupeoides
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Denticipitoidei; Denticipitidae; Denticeps
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    Genomic context

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    See fchsd2 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    100 current fDenClu1.1 (GCF_900700375.1) 19 NC_041725.1 (7475638..7529643, complement)

    Chromosome 19 - NC_041725.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD15 Neighboring gene NACHT and WD repeat domain-containing protein 2-like Neighboring gene ribosomal protein S3 Neighboring gene purinergic receptor P2Y2 Neighboring gene RELT TNF receptor Neighboring gene Rho guanine nucleotide exchange factor 17

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041725.1 Chromosome 19 Reference fDenClu1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in neuromuscular synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuromuscular junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in recycling endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: F-BAR and double SH3 domains protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Denticeps clupeoides Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fDenClu1.1

    Genomic

    1. NC_041725.1 Reference fDenClu1.1

      Range
      7475638..7529643 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028962029.1 → XP_028817862.1  LOW QUALITY PROTEIN: F-BAR and double SH3 domains protein 2

      UniProtKB/TrEMBL
      A0A8C4G7S9
      Related
      ENSDCDP00000051307.1, ENSDCDT00000063059.1
      Conserved Domains (3) summary
      cd11761
      Location:472 → 528
      SH3_FCHSD_1; First Src Homology 3 domain of FCH and double SH3 domains proteins
      cd11894
      Location:572 → 627
      SH3_FCHSD2_2; Second Src Homology 3 domain of FCH and double SH3 domains protein 2
      cl12013
      Location:18 → 276
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
    Nucleotide Protein
    Heading Accession and Version

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