U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    SERPINA4 serpin family A member 4 [ Homo sapiens (human) ]

    Gene ID: 5267, updated on 14-Nov-2024

    Summary

    Official Symbol
    SERPINA4provided by HGNC
    Official Full Name
    serpin family A member 4provided by HGNC
    Primary source
    HGNC:HGNC:8948
    See related
    Ensembl:ENSG00000100665 MIM:147935; AllianceGenome:HGNC:8948
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    KAL; KST; PI4; KLST; PI-4; kallistatin
    Summary
    Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be involved in negative regulation of peptidase activity. Located in extracellular exosome. Biomarker of diabetic retinopathy. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in liver (RPKM 98.1), gall bladder (RPKM 28.7) and 2 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See SERPINA4 in Genome Data Viewer
    Location:
    14q32.13
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (94561442..94569906)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (88791396..88799857)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (95027779..95036243)

    Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene serpin family A member 12 Neighboring gene uncharacterized LOC124903410 Neighboring gene serpin family A member 5 Neighboring gene uncharacterized LOC112268127 Neighboring gene uncharacterized LOC124903411

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    kallistatin
    Names
    kallikrein inhibitor
    peptidase inhibitor 4
    protease inhibitor 4 (kallistatin)
    serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4
    serpin A4
    serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4
    sserpin family A member 4
    testicular secretory protein Li 22

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001289032.2NP_001275961.1  kallistatin isoform 1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) is the longest transcript and encodes the longest isoform (1).
      Source sequence(s)
      AK309586, BC014992
      UniProtKB/TrEMBL
      B2R815
      Conserved Domains (1) summary
      cd02056
      Location:91458
      alpha-1-antitrypsin_like; alpha-1-antitrypsin_like. This family contains a variety of different members of clade A of the serpin superfamily. They include the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, ...
    2. NM_001289033.2NP_001275962.1  kallistatin isoform 2 precursor

      See identical proteins and their annotated locations for NP_001275962.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) has an alternate splice site in the 5' region, which results in translation initiation at a downstream AUG codon, compared to variant 1. The resulting isoform (2) has a shorter N-terminus, compared to isoform 1. Both variants 2 and 3 encode the same isoform 2.
      Source sequence(s)
      BC014992, BX248009, DA036536, DA637776
      Consensus CDS
      CCDS9927.1
      UniProtKB/Swiss-Prot
      P29622, Q53XB5, Q86TR9, Q96BZ5
      UniProtKB/TrEMBL
      A0A024R6I9, B2R815
      Related
      ENSP00000298841.5, ENST00000298841.5
      Conserved Domains (1) summary
      cd02056
      Location:54421
      alpha-1-antitrypsin_like; alpha-1-antitrypsin_like. This family contains a variety of different members of clade A of the serpin superfamily. They include the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, ...
    3. NM_006215.4NP_006206.2  kallistatin isoform 2 precursor

      See identical proteins and their annotated locations for NP_006206.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) has an alternate splice site in the 5' region, which results in translation initiation at a downstream AUG codon, compared to variant 1. The resulting isoform (2) has a shorter N-terminus, compared to isoform 1. Both variants 2 and 3 encode the same isoform 2.
      Source sequence(s)
      BC014992, BX248760, DA036536
      Consensus CDS
      CCDS9927.1
      UniProtKB/Swiss-Prot
      P29622, Q53XB5, Q86TR9, Q96BZ5
      UniProtKB/TrEMBL
      A0A024R6I9, B2R815
      Related
      ENSP00000450838.1, ENST00000557004.6
      Conserved Domains (1) summary
      cd02056
      Location:54421
      alpha-1-antitrypsin_like; alpha-1-antitrypsin_like. This family contains a variety of different members of clade A of the serpin superfamily. They include the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, ...

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

      Range
      94561442..94569906
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060938.1 Alternate T2T-CHM13v2.0

      Range
      88791396..88799857
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)