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    HAX1P1 HAX1 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 100129661, updated on 17-Sep-2024

    Summary

    Official Symbol
    HAX1P1provided by HGNC
    Official Full Name
    HAX1 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:55151
    See related
    AllianceGenome:HGNC:55151
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See HAX1P1 in Genome Data Viewer
    Location:
    Xq28
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (148197832..148198973, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (146464212..146465353, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (147279352..147280493, complement)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene RNA, 5S ribosomal pseudogene 524 Neighboring gene FMR1 neighbor Neighboring gene ferritin heavy chain 1 pseudogene 8 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 30008 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:147507788-147508643 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:147522255-147522928 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:147522929-147523603 Neighboring gene origin of replication in 5' region of AFF2/FMR2 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:147582797-147583674 Neighboring gene RPL7L1 pseudogene 11 Neighboring gene MED14-independent group 3 enhancer GRCh37_chrX:147636485-147637684 Neighboring gene fragile site, folic acid type, rare, fra(X)(q28) E Neighboring gene ATAC-STARR-seq lymphoblastoid active region 30009 Neighboring gene ALF transcription elongation factor 2 Neighboring gene RN7SK pseudogene 267

    Genomic regions, transcripts, and products

    Phenotypes

    EBI GWAS Catalog

    Description
    Acetaminophen-NAPQI hepatotoxicity: a cell line model system genome-wide association study.
    EBI GWAS Catalog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_022646.3 

      Range
      101..1242
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      148197832..148198973 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      146464212..146465353 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)