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    Ndufa11b NADH:ubiquinone oxidoreductase subunit A11B [ Mus musculus (house mouse) ]

    Gene ID: 239760, updated on 2-Nov-2024

    Summary

    Official Symbol
    Ndufa11bprovided by MGI
    Official Full Name
    NADH:ubiquinone oxidoreductase subunit A11Bprovided by MGI
    Primary source
    MGI:MGI:3645174
    See related
    AllianceGenome:MGI:3645174
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm4943; EG239760
    Summary
    Predicted to be involved in mitochondrial respiratory chain complex I assembly. Predicted to be located in mitochondrial inner membrane. Predicted to be part of respiratory chain complex I. Human ortholog(s) of this gene implicated in communication disorder and nuclear type mitochondrial complex I deficiency 14. Orthologous to human NDUFA11 (NADH:ubiquinone oxidoreductase subunit A11). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in duodenum adult (RPKM 12.5), heart adult (RPKM 8.9) and 16 other tissues See more
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    Genomic context

    See Ndufa11b in Genome Data Viewer
    Location:
    16 B1; 16 13.01 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (21872437..21873103)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (22053687..22054353)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_40375 Neighboring gene lipase, member H Neighboring gene STARR-seq mESC enhancer starr_40377 Neighboring gene STARR-seq mESC enhancer starr_40378 Neighboring gene STARR-positive B cell enhancer ABC_E393 Neighboring gene STARR-seq mESC enhancer starr_40381 Neighboring gene SUMO/sentrin specific peptidase 2 Neighboring gene insulin-like growth factor 2 mRNA binding protein 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr16:22108158-22108341 Neighboring gene CapStarr-seq enhancer MGSCv37_chr16:22131539-22131740 Neighboring gene STARR-seq mESC enhancer starr_40384 Neighboring gene STARR-seq mESC enhancer starr_40387 Neighboring gene predicted gene, 25810

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Other Names

    • predicted pseudogene 4943

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in mitochondrial respiratory chain complex I assembly ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane ISO
    Inferred from Sequence Orthology
    more info
     
    part_of respiratory chain complex I ISO
    Inferred from Sequence Orthology
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_163734.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      CT009567

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      21872437..21873103
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)