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    nfatc3a nuclear factor of activated T cells 3a [ Sphaeramia orbicularis (orbiculate cardinalfish) ]

    Gene ID: 115439602, updated on 17-Mar-2024

    Summary

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    Gene symbol
    nfatc3a
    Gene description
    nuclear factor of activated T cells 3a
    See related
    Ensembl:ENSSORG00005020423
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sphaeramia orbicularis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Kurtiformes; Apogonoidei; Apogonidae; Apogoninae; Sphaeramia
    Also known as
    nfatc3
    Orthologs
    human zebrafish all
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    Genomic context

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    See nfatc3a in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current fSphaOr1.1 (GCF_902148855.1) 3 NC_043959.1 (40750604..40820858)

    Chromosome 3 - NC_043959.1Genomic Context describing neighboring genes Neighboring gene talin 2a Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 Neighboring gene uncharacterized LOC115437421 Neighboring gene epithelial splicing regulatory protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_043959.1 Chromosome 3 Reference fSphaOr1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcineurin-NFAT signaling cascade IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytokine production IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear factor of activated T-cells, cytoplasmic 3
    Names
    nuclear factor of activated T cells 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sphaeramia orbicularis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSphaOr1.1

    Genomic

    1. NC_043959.1 Reference fSphaOr1.1

      Range
      40750604..40820858
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030163447.1 → XP_030019307.1  nuclear factor of activated T-cells, cytoplasmic 3

      UniProtKB/TrEMBL
      A0A673BNK9, A0A673BR86
      Related
      ENSSORP00005044300.1, ENSSORT00005045422.1
      Conserved Domains (3) summary
      cd07881
      Location:433 → 606
      RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
      PHA03247
      Location:725 → 1043
      PHA03247; large tegument protein UL36; Provisional
      cd01178
      Location:611 → 710
      IPT_NFAT; IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.
    Nucleotide Protein
    Heading Accession and Version

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