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    ARHGEF26 Rho guanine nucleotide exchange factor 26 [ Lynx canadensis (Canada lynx) ]

    Gene ID: 115523477, updated on 13-Aug-2024

    Summary

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    Gene symbol
    ARHGEF26
    Gene description
    Rho guanine nucleotide exchange factor 26
    See related
    Ensembl:ENSLCNG00005011391
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lynx canadensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx
    Orthologs
    human mouse all
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    Genomic context

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    See ARHGEF26 in Genome Data Viewer
    Location:
    chromosome: C2
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    102 current mLynCan4.pri.v2 (GCF_007474595.2) C2 NC_044311.2 (48525316..48660280)
    101 previous assembly mLynCan4_v1.p (GCF_007474595.1) C2 NC_044311.1 (48525316..48660280)

    Chromosome C2 - NC_044311.2Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC115523936 Neighboring gene DEAH-box helicase 36

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in activation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rho guanine nucleotide exchange factor 26

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Lynx canadensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mLynCan4.pri.v2

    Genomic

    1. NC_044311.2 Reference mLynCan4.pri.v2

      Range
      48525316..48660280
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030329554.1 → XP_030185414.1  rho guanine nucleotide exchange factor 26 isoform X2

      UniProtKB/TrEMBL
      A0A667GUS4
      Conserved Domains (4) summary
      cd11938
      Location:783 → 837
      SH3_ARHGEF16_26; Src homology 3 domain of the Rho guanine nucleotide exchange factors ARHGEF16 and ARHGEF26
      PHA03247
      Location:24 → 240
      PHA03247; large tegument protein UL36; Provisional
      cd01221
      Location:633 → 771
      PH_ephexin; Ephexin Pleckstrin homology (PH) domain
      pfam00621
      Location:442 → 611
      RhoGEF; RhoGEF domain

    2. XM_030329555.1 → XP_030185415.1  rho guanine nucleotide exchange factor 26 isoform X3

      UniProtKB/TrEMBL
      A0A667GUS4, A0A667H9Z5
      Related
      ENSLCNP00005017333.1, ENSLCNT00005019447.1
      Conserved Domains (4) summary
      cd11938
      Location:741 → 795
      SH3_ARHGEF16_26; Src homology 3 domain of the Rho guanine nucleotide exchange factors ARHGEF16 and ARHGEF26
      PHA03247
      Location:24 → 240
      PHA03247; large tegument protein UL36; Provisional
      cd01221
      Location:591 → 729
      PH_ephexin; Ephexin Pleckstrin homology (PH) domain
      pfam00621
      Location:442 → 569
      RhoGEF; RhoGEF domain

    3. XM_030329552.1 → XP_030185412.1  rho guanine nucleotide exchange factor 26 isoform X1

      UniProtKB/TrEMBL
      A0A667GUR6, A0A667GUS4
      Conserved Domains (4) summary
      cd11938
      Location:792 → 846
      SH3_ARHGEF16_26; Src homology 3 domain of the Rho guanine nucleotide exchange factors ARHGEF16 and ARHGEF26
      PHA03247
      Location:24 → 240
      PHA03247; large tegument protein UL36; Provisional
      cd01221
      Location:642 → 780
      PH_ephexin; Ephexin Pleckstrin homology (PH) domain
      pfam00621
      Location:442 → 620
      RhoGEF; RhoGEF domain

    4. XM_030329553.1 → XP_030185413.1  rho guanine nucleotide exchange factor 26 isoform X1

      UniProtKB/TrEMBL
      A0A667GUR6, A0A667GUS4
      Related
      ENSLCNP00005017309.1, ENSLCNT00005019421.1
      Conserved Domains (4) summary
      cd11938
      Location:792 → 846
      SH3_ARHGEF16_26; Src homology 3 domain of the Rho guanine nucleotide exchange factors ARHGEF16 and ARHGEF26
      PHA03247
      Location:24 → 240
      PHA03247; large tegument protein UL36; Provisional
      cd01221
      Location:642 → 780
      PH_ephexin; Ephexin Pleckstrin homology (PH) domain
      pfam00621
      Location:442 → 620
      RhoGEF; RhoGEF domain
    Nucleotide Protein
    Heading Accession and Version

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