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    LMO2 LIM domain only 2 [ Lynx canadensis (Canada lynx) ]

    Gene ID: 115525101, updated on 13-Aug-2024

    Summary

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    Gene symbol
    LMO2
    Gene description
    LIM domain only 2
    See related
    Ensembl:ENSLCNG00005011937
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lynx canadensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx
    Orthologs
    human mouse all
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    Genomic context

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    See LMO2 in Genome Data Viewer
    Location:
    chromosome: D1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    102 current mLynCan4.pri.v2 (GCF_007474595.2) D1 NC_044312.2 (88134847..88145331, complement)
    101 previous assembly mLynCan4_v1.p (GCF_007474595.1) D1 NC_044312.1 (88134847..88145331, complement)

    Chromosome D1 - NC_044312.2Genomic Context describing neighboring genes Neighboring gene CD59 molecule (CD59 blood group) Neighboring gene F-box protein 3 Neighboring gene uncharacterized LOC115525644 Neighboring gene uncharacterized LOC115525643

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rhombotin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Lynx canadensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mLynCan4.pri.v2

    Genomic

    1. NC_044312.2 Reference mLynCan4.pri.v2

      Range
      88134847..88145331 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030332069.1 → XP_030187929.1  rhombotin-2 isoform X1

      Conserved Domains (2) summary
      cd09384
      Location:187 → 242
      LIM1_LMO2; The first LIM domain of LMO2 (LIM domain only protein 2)
      cd09385
      Location:251 → 306
      LIM2_LMO2; The second LIM domain of LMO2 (LIM domain only protein 2)

    2. XM_030332070.1 → XP_030187930.1  rhombotin-2 isoform X2

      UniProtKB/TrEMBL
      A0A667HET9
      Related
      ENSLCNP00005018183.1, ENSLCNT00005020399.1
      Conserved Domains (2) summary
      cd09384
      Location:96 → 151
      LIM1_LMO2; The first LIM domain of LMO2 (LIM domain only protein 2)
      cd09385
      Location:160 → 215
      LIM2_LMO2; The second LIM domain of LMO2 (LIM domain only protein 2)
    Nucleotide Protein
    Heading Accession and Version

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