U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    LOC115588077 magnesium transporter NIPA3-like [ Sparus aurata (gilthead seabream) ]

    Gene ID: 115588077, updated on 21-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC115588077
    Gene description
    magnesium transporter NIPA3-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sparus aurata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Sparus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC115588077 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current fSpaAur1.1 (GCF_900880675.1) 1 NC_044187.1 (5121680..5126580, complement)

    Chromosome 1 - NC_044187.1Genomic Context describing neighboring genes Neighboring gene sialoadhesin-like Neighboring gene uncharacterized LOC115587720 Neighboring gene uncharacterized LOC115587788 Neighboring gene B-cell receptor CD22-like Neighboring gene uncharacterized LOC115587901

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_044187.1 Chromosome 1 Reference fSpaAur1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables magnesium ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in magnesium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    LOW QUALITY PROTEIN: magnesium transporter NIPA3-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Sparus aurata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSpaAur1.1 Primary Assembly

    Genomic

    1. NC_044187.1 Reference fSpaAur1.1 Primary Assembly

      Range
      5121680..5126580 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030428389.1 → XP_030284249.1  LOW QUALITY PROTEIN: magnesium transporter NIPA3-like

      UniProtKB/TrEMBL
      A0A671TQA2
      Conserved Domains (1) summary
      cl23754
      Location:19 → 272
      EamA; EamA-like transporter family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases