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    • Showing Current items.

    Y45F10C.4 UPF0375 protein Y45F10C.4 [ Caenorhabditis elegans ]

    Gene ID: 178335, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Y45F10C.4
    Official Full Name
    UPF0375 protein Y45F10C.4
    Primary source
    WormBase:WBGene00012880
    Locus tag
    CELE_Y45F10C.4
    See related
    AllianceGenome:WB:WBGene00012880
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See Y45F10C.4 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    3
    Sequence:
    Chromosome: IV; NC_003282.8 (13663398..13664190, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene UPF0375 protein Y45F10C.2 Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    UPF0375 protein Y45F10C.4
    NP_502640.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      13663398..13664190 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_070239.6 → NP_502640.1  UPF0375 protein Y45F10C.4 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502640.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O45944
      Conserved Domains (1) summary
      pfam07403
      Location:1 → 114
      DUF1505; Protein of unknown function (DUF1505)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O45944.1

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