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    far-5 Fatty-acid and retinol-binding protein 1 [ Caenorhabditis elegans ]

    Gene ID: 184522, updated on 2-Nov-2024

    Summary

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    Official Symbol
    far-5
    Official Full Name
    Fatty-acid and retinol-binding protein 1
    Primary source
    WormBase:WBGene00001389
    Locus tag
    CELE_F15B9.3
    See related
    AllianceGenome:WB:WBGene00001389
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable lipid binding activity. Is expressed in male. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See far-5 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    2
    Sequence:
    Chromosome: V; NC_003283.11 (12995569..12996836)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene YggT family protein Neighboring gene Delta-like protein Neighboring gene Fatty-acid and retinol-binding protein 1 Neighboring gene DUF148 domain-containing protein Neighboring gene FH2 domain-containing protein Neighboring gene ncRNA Neighboring gene tRNA-Ala

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The FAR protein family of the nematode Caenorhabditis elegans. Differential lipid binding properties, structural characteristics, and developmental regulation. Garofalo A, et al. J Biol Chem, 2003 Mar 7. PMID 12502713
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Fatty-acid and retinol-binding protein 1
    NP_001129891.1
    • Confirmed by transcript evidence
    NP_506250.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      12995569..12996836
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_073849.6 → NP_506250.2  Fatty-acid and retinol-binding protein 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506250.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q19480
      Conserved Domains (1) summary
      pfam05823
      Location:28 → 169
      Gp-FAR-1; Nematode fatty acid retinoid binding protein (Gp-FAR-1)

    2. NM_001136419.4 → NP_001129891.1  Fatty-acid and retinol-binding protein 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001129891.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B5U8N0
      Conserved Domains (1) summary
      pfam05823
      Location:1 → 62
      Gp-FAR-1; Nematode fatty acid retinoid binding protein (Gp-FAR-1)
    Nucleotide Protein
    Heading Accession and Version

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