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    HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 [ Chiroxiphia lanceolata (lance-tailed manakin) ]

    Gene ID: 116789886, updated on 3-Aug-2024

    Summary

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    Gene symbol
    HNRNPH3
    Gene description
    heterogeneous nuclear ribonucleoprotein H3
    See related
    EnsemblRapid:ENSCLNG00000005056
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chiroxiphia lanceolata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Chiroxiphia
    Orthologs
    human mouse all
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    Genomic context

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    See HNRNPH3 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current bChiLan1.pri (GCF_009829145.1) 8 NC_045644.1 (33340692..33347762)

    Chromosome 8 - NC_045644.1Genomic Context describing neighboring genes Neighboring gene atonal bHLH transcription factor 7 Neighboring gene phenazine biosynthesis like protein domain containing Neighboring gene RUN and FYVE domain containing 2 Neighboring gene DNA replication helicase/nuclease 2 Neighboring gene tet methylcytosine dioxygenase 1 Neighboring gene solute carrier family 25 member 16

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045644.1 Chromosome 8 Reference bChiLan1.pri

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heterogeneous nuclear ribonucleoprotein H3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chiroxiphia lanceolata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bChiLan1.pri

    Genomic

    1. NC_045644.1 Reference bChiLan1.pri

      Range
      33340692..33347762
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032694154.1 → XP_032550045.1  heterogeneous nuclear ribonucleoprotein H3 isoform X7

      Conserved Domains (2) summary
      cd12735
      Location:183 → 257
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily

    2. XM_032694152.1 → XP_032550043.1  heterogeneous nuclear ribonucleoprotein H3 isoform X6

      Related
      ENSCLNP00000007220.1, ENSCLNT00000007673.1
      Conserved Domains (2) summary
      cd12735
      Location:198 → 272
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily

    3. XM_032694153.1 → XP_032550044.1  heterogeneous nuclear ribonucleoprotein H3 isoform X6

      Conserved Domains (2) summary
      cd12735
      Location:198 → 272
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily

    4. XM_032694155.1 → XP_032550046.1  heterogeneous nuclear ribonucleoprotein H3 isoform X7

      Conserved Domains (2) summary
      cd12735
      Location:183 → 257
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily

    5. XM_032694156.1 → XP_032550047.1  heterogeneous nuclear ribonucleoprotein H3 isoform X8

      Conserved Domains (2) summary
      cd12735
      Location:202 → 276
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily

    6. XM_032694149.1 → XP_032550040.1  heterogeneous nuclear ribonucleoprotein H3 isoform X4

      Conserved Domains (2) summary
      cd12735
      Location:202 → 276
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily

    7. XM_032694148.1 → XP_032550039.1  heterogeneous nuclear ribonucleoprotein H3 isoform X3

      Conserved Domains (2) summary
      cd12735
      Location:187 → 261
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily

    8. XM_032694143.1 → XP_032550034.1  heterogeneous nuclear ribonucleoprotein H3 isoform X1

      Conserved Domains (2) summary
      cd12735
      Location:202 → 276
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily

    9. XM_032694150.1 → XP_032550041.1  heterogeneous nuclear ribonucleoprotein H3 isoform X5

      Conserved Domains (2) summary
      cd12735
      Location:183 → 257
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily

    10. XM_032694145.1 → XP_032550036.1  heterogeneous nuclear ribonucleoprotein H3 isoform X1

      Conserved Domains (2) summary
      cd12735
      Location:202 → 276
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily

    11. XM_032694151.1 → XP_032550042.1  heterogeneous nuclear ribonucleoprotein H3 isoform X5

      Conserved Domains (2) summary
      cd12735
      Location:183 → 257
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily

    12. XM_032694144.1 → XP_032550035.1  heterogeneous nuclear ribonucleoprotein H3 isoform X1

      Conserved Domains (2) summary
      cd12735
      Location:202 → 276
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily

    13. XM_032694158.1 → XP_032550049.1  heterogeneous nuclear ribonucleoprotein H3 isoform X9

      Conserved Domains (2) summary
      cd12735
      Location:198 → 272
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily

    14. XM_032694147.1 → XP_032550038.1  heterogeneous nuclear ribonucleoprotein H3 isoform X2

      Conserved Domains (2) summary
      cd12735
      Location:198 → 272
      RRM3_hnRNPH3; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
      cl17169
      Location:1 → 95
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein
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