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    GLB1L galactosidase beta 1 like [ Parus major (Great Tit) ]

    Gene ID: 107207620, updated on 3-Aug-2024

    Summary

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    Gene symbol
    GLB1L
    Gene description
    galactosidase beta 1 like
    See related
    Ensembl:ENSPMJG00000019714
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Parus major
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
    Orthologs
    human mouse all
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    Genomic context

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    See GLB1L in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    102 current Parus_major1.1 (GCF_001522545.3) 7 NC_031776.1 (21991778..21997203)
    100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 7 NC_029276.1 (21991403..21997203)

    Chromosome 7 - NC_031776.1Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member B2 Neighboring gene tubulin alpha 4a Neighboring gene serine/threonine kinase 16 Neighboring gene ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 Neighboring gene uncharacterized LOC117244700 Neighboring gene autophagy related 9A Neighboring gene ATP binding cassette subfamily B member 6 (LAN blood group) Neighboring gene zinc finger AN1-type containing 2B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables beta-galactosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in vacuole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta-galactosidase-1-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Parus_major1.1 Primary Assembly

    Genomic

    1. NC_031776.1 Reference Parus_major1.1 Primary Assembly

      Range
      21991778..21997203
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015635082.3 → XP_015490568.2  beta-galactosidase-1-like protein

      Related
      ENSPMJP00000027042.1, ENSPMJT00000034779.1
      Conserved Domains (2) summary
      pfam01301
      Location:55 → 371
      Glyco_hydro_35; Glycosyl hydrolases family 35
      pfam13364
      Location:533 → 622
      BetaGal_dom4_5; Beta-galactosidase jelly roll domain
    Nucleotide Protein
    Heading Accession and Version

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