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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001093754.2 → NP_001087223.1 DENN domain-containing protein 2D isoform 2
See identical proteins and their annotated locations for NP_001087223.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (2) is shorter and has a distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AC140380, AK008546
- Consensus CDS
-
CCDS51040.1
- UniProtKB/Swiss-Prot
- Q3U028, Q91VV4, Q9D831
- Related
- ENSMUSP00000029508.5, ENSMUST00000029508.11
- Conserved Domains (3) summary
-
- smart00801
Location:369 → 434
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00800
Location:47 → 139
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
- pfam02141
Location:147 → 330
- DENN; DENN (AEX-3) domain
-
NM_001278941.1 → NP_001265870.1 DENN domain-containing protein 2D isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) has an alternate 5' UTR and uses a downstream start codon compared to variant 1. It encodes isoform 3 which has a shorter N-terminus compared to isoform 1.
- Source sequence(s)
-
AC140380, AK008546, AK050033
- UniProtKB/Swiss-Prot
-
Q91VV4
- Conserved Domains (2) summary
-
- smart00801
Location:192 → 257
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- pfam02141
Location:4 → 153
- DENN; DENN (AEX-3) domain
-
NM_028110.2 → NP_082386.2 DENN domain-containing protein 2D isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the shortest transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC140380
- Consensus CDS
-
CCDS17722.2
- UniProtKB/Swiss-Prot
- Q3U028, Q91VV4, Q9D831
- UniProtKB/TrEMBL
-
S4R219
- Related
- ENSMUSP00000138462.2, ENSMUST00000183271.2
- Conserved Domains (3) summary
-
- smart00801
Location:379 → 444
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00800
Location:57 → 149
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
- pfam02141
Location:157 → 340
- DENN; DENN (AEX-3) domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000069.7 Reference GRCm39 C57BL/6J
- Range
-
106389745..106410346
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_030252838.2 → XP_030108698.1 DENN domain-containing protein 2D isoform X1
- Conserved Domains (3) summary
-
- smart00801
Location:318 → 383
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- pfam02141
Location:96 → 279
- DENN; DENN (AEX-3) domain
- cl04085
Location:66 → 88
- uDENN; uDENN domain
RNA
-
XR_003954399.2 RNA Sequence
-
XR_003954396.2 RNA Sequence