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    LOC115212743 5-aminolevulinate synthase, nonspecific, mitochondrial [ Octopus sinensis (East Asian common octopus) ]

    Gene ID: 115212743, updated on 4-Jul-2024

    Summary

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    Gene symbol
    LOC115212743
    Gene description
    5-aminolevulinate synthase, nonspecific, mitochondrial
    See related
    EnsemblRapid:LOC115212743
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Octopus sinensis
    Lineage
    Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Cephalopoda; Coleoidea; Octopodiformes; Octopoda; Incirrata; Octopodidae; Octopus
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    Genomic context

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    See LOC115212743 in Genome Data Viewer
    Location:
    chromosome: LG6
    Exon count:
    13
    Annotation release Status Assembly LG Location
    101 current ASM634580v1 (GCF_006345805.1) LG6 NC_043002.1 (118781956..118909885)

    Linkage Group LG6 - NC_043002.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118764034 Neighboring gene laminin subunit beta-1 Neighboring gene ubiquitin-conjugating enzyme E2 N Neighboring gene uncharacterized LOC118764035 Neighboring gene uncharacterized LOC118764036

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_043002.1 Chromosome LG6 Reference ASM634580v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 5-aminolevulinate synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in erythrocyte development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in heme biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in hemoglobin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    5-aminolevulinate synthase, nonspecific, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Octopus sinensis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM634580v1 Primary Assembly

    Genomic

    1. NC_043002.1 Reference ASM634580v1 Primary Assembly

      Range
      118781956..118909885
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036504303.1 → XP_036360196.1  5-aminolevulinate synthase, nonspecific, mitochondrial isoform X1

      Related
      XP_036360196.1, XM_036504303.1
      Conserved Domains (2) summary
      pfam09029
      Location:7 → 83
      Preseq_ALAS; 5-aminolevulinate synthase presequence
      cl18945
      Location:182 → 585
      AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

    2. XM_036504305.1 → XP_036360198.1  5-aminolevulinate synthase, nonspecific, mitochondrial isoform X1

      Related
      XP_036360198.1, XM_036504305.1
      Conserved Domains (2) summary
      pfam09029
      Location:7 → 83
      Preseq_ALAS; 5-aminolevulinate synthase presequence
      cl18945
      Location:182 → 585
      AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

    3. XM_029781401.2 → XP_029637261.1  5-aminolevulinate synthase, nonspecific, mitochondrial isoform X2

      Related
      XP_029637261.1, XM_029781401.2
      Conserved Domains (1) summary
      cl18945
      Location:142 → 545
      AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

    4. XM_036504306.1 → XP_036360199.1  5-aminolevulinate synthase, nonspecific, mitochondrial isoform X3

      Related
      XP_036360199.1, XM_036504306.1
      Conserved Domains (2) summary
      pfam09029
      Location:7 → 83
      Preseq_ALAS; 5-aminolevulinate synthase presequence
      cl18945
      Location:182 → 427
      AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

    5. XM_029781400.2 → XP_029637260.1  5-aminolevulinate synthase, nonspecific, mitochondrial isoform X1

      Related
      XP_029637260.1, XM_029781400.2
      Conserved Domains (2) summary
      pfam09029
      Location:7 → 83
      Preseq_ALAS; 5-aminolevulinate synthase presequence
      cl18945
      Location:182 → 585
      AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

    6. XM_036504304.1 → XP_036360197.1  5-aminolevulinate synthase, nonspecific, mitochondrial isoform X1

      Related
      XP_036360197.1, XM_036504304.1
      Conserved Domains (2) summary
      pfam09029
      Location:7 → 83
      Preseq_ALAS; 5-aminolevulinate synthase presequence
      cl18945
      Location:182 → 585
      AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    Nucleotide Protein
    Heading Accession and Version

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