Vom2r18 vomeronasal 2 receptor, 18 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Vom2r18provided by RGD
Official Full Name: vomeronasal 2 receptor, 18provided by RGD
Primary source: RGD:708409
See related: EnsemblRapid:ENSRNOG00000073158 AllianceGenome:RGD:708409
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Nov 2024]
Expression: Low expression observed in reference dataset See more
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Genomic context

Location:: 1q12

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	1	NC_086019.1 (72566309..72583584)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	1	NC_051336.1 (63651332..63668610)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	8	NC_005107.4 (4320230..4337885)

Chromosome 1 - NC_086019.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in G protein-coupled receptor signaling pathway	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: vomeronasal 2 receptor, 18

Names: putative pheromone receptor (Go-VN4)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_173318.2 → NP_775440.1 vomeronasal 2 receptor, 18

See identical proteins and their annotated locations for NP_775440.1

Status: PROVISIONAL

Source sequence(s)

JAXUCZ010000001

UniProtKB/TrEMBL

F1LZ25, O35268

Related

ENSRNOP00000064924.1, ENSRNOT00000071544.5

Conserved Domains (4) summary

cd06365
Location:47 → 513

PBP1_Pheromone_receptor; Ligand-binding domain of the V2R phermone receptor, a member of the family C receptors within the G-protein coupled receptor superfamily

pfam00003
Location:607 → 841

7tm_3; 7 transmembrane sweet-taste receptor of 3 GCPR

pfam01094
Location:85 → 480

ANF_receptor; Receptor family ligand binding region

pfam07562
Location:522 → 573

NCD3G; Nine Cysteines Domain of family 3 GPCR