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    ACKR2 atypical chemokine receptor 2 [ Anas platyrhynchos (mallard) ]

    Gene ID: 101797665, updated on 8-Mar-2024

    Summary

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    Gene symbol
    ACKR2
    Gene description
    atypical chemokine receptor 2
    Locus tag
    Anapl_08711
    See related
    EnsemblRapid:ENSAPLG00030009647
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anas platyrhynchos
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
    Also known as
    CCBP2
    Orthologs
    human mouse all
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    Genomic context

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    See ACKR2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    104 current ZJU1.0 (GCF_015476345.1) 2 NC_051773.1 (161364255..161368202)
    103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 2 NC_040047.1 (2691570..2696322, complement)

    Chromosome 2 - NC_051773.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 13 Neighboring gene 5-beta-cholestane-3-alpha,7-alpha-diol 12-alpha-hydroxylase Neighboring gene HIG1 hypoxia inducible domain family member 1A Neighboring gene obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chemokine receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    atypical chemokine receptor 2
    Names
    chemokine binding protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ZJU1.0 Primary Assembly

    Genomic

    1. NC_051773.1 Reference ZJU1.0 Primary Assembly

      Range
      161364255..161368202
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013103559.4 → XP_012959013.1  atypical chemokine receptor 2 isoform X2

      UniProtKB/TrEMBL
      R0L9T4
      Conserved Domains (1) summary
      pfam00001
      Location:117 → 353
      7tm_1; 7 transmembrane receptor (rhodopsin family)

    2. XM_038175536.1 → XP_038031464.1  atypical chemokine receptor 2 isoform X3

      UniProtKB/TrEMBL
      R0L9T4
      Related
      ENSAPLP00030017906.1, ENSAPLT00030024998.1
      Conserved Domains (2) summary
      cd14964
      Location:40 → 67
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:40 → 316
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    3. XM_013103557.4 → XP_012959011.2  atypical chemokine receptor 2 isoform X3

      UniProtKB/TrEMBL
      R0L9T4
      Related
      ENSAPLP00030017914.1, ENSAPLT00030025015.1
      Conserved Domains (2) summary
      cd14964
      Location:40 → 67
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:40 → 316
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    4. XM_038175535.1 → XP_038031463.1  atypical chemokine receptor 2 isoform X1

      UniProtKB/TrEMBL
      R0L9T4
      Conserved Domains (1) summary
      cd15188
      Location:89 → 365
      7tmA_ACKR2_D6; atypical chemokine receptor 2, member of the class A family of seven-transmembrane G protein-coupled receptors
    Nucleotide Protein
    Heading Accession and Version

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