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    HMGB2 high mobility group box 2 [ Chrysemys picta (Painted turtle) ]

    Gene ID: 101939564, updated on 8-Mar-2024

    Summary

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    Gene symbol
    HMGB2
    Gene description
    high mobility group box 2
    See related
    Ensembl:ENSCPBG00000002686
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chrysemys picta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
    Also known as
    HMG-2
    Orthologs
    human mouse all
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    Genomic context

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    See HMGB2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Chrysemys_picta_BioNano-3.0.4 (GCF_000241765.4) Unplaced Scaffold NW_024885826.1 (27602509..27605085)
    102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281377.1 (5415087..5417647, complement)

    NW_024885826.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101939836 Neighboring gene Sin3A associated protein 30 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 7 Neighboring gene uncharacterized LOC101938927 Neighboring gene polypeptide N-acetylgalactosaminyltransferase like 6 Neighboring gene uncharacterized LOC122172351

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding, bending IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    high mobility group protein B2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chrysemys picta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

    Genomic

    1. NW_024885826.1 Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

      Range
      27602509..27605085
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005300049.4 → XP_005300106.1  high mobility group protein B2

      See identical proteins and their annotated locations for XP_005300106.1

      UniProtKB/TrEMBL
      A0A8C3FCA7
      Related
      ENSCPBP00000003320.1
      Conserved Domains (2) summary
      pfam00505
      Location:95 → 162
      HMG_box; HMG (high mobility group) box
      pfam09011
      Location:6 → 78
      HMG_box_2; HMG-box domain
    Nucleotide Protein
    Heading Accession and Version

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