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    LOC101036719 IgGFc-binding protein [ Saimiri boliviensis (Bolivian squirrel monkey) ]

    Gene ID: 101036719, updated on 16-Nov-2023

    Summary

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    Gene symbol
    LOC101036719
    Gene description
    IgGFc-binding protein
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Saimiri boliviensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
    Also known as
    FCGBP
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    Genomic context

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    See LOC101036719 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024102494.1 (1748..11783, complement)

    NW_024102494.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024102494 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    IgGFc-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BCM_Sbol_2.0 Primary Assembly

    Genomic

    1. NW_024102494.1 Reference BCM_Sbol_2.0 Primary Assembly

      Range
      1748..11783 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039467361.1 → XP_039323295.1  IgGFc-binding protein isoform X1

      Conserved Domains (5) summary
      smart00832
      Location:504 → 578
      C8; This domain contains 8 conserved cysteine residues
      cl17735
      Location:253 → 309
      VWC; von Willebrand factor type C domain
      pfam00094
      Location:316 → 466
      VWD; von Willebrand factor type D domain
      cd19941
      Location:194 → 249
      TIL; trypsin inhibitor-like cysteine rich domain
      cl02516
      Location:7 → 76
      VWD; von Willebrand factor type D domain

    2. XM_039467362.1 → XP_039323296.1  IgGFc-binding protein isoform X2

      Conserved Domains (4) summary
      smart00832
      Location:119 → 194
      C8; This domain contains 8 conserved cysteine residues
      cl17735
      Location:252 → 305
      VWC; von Willebrand factor type C domain
      pfam01826
      Location:197 → 250
      TIL; Trypsin Inhibitor like cysteine rich domain
      cl02516
      Location:338 → 423
      VWD; von Willebrand factor type D domain
    Nucleotide Protein
    Heading Accession and Version

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