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    LOC121790067 metal tolerance protein 10-like [ Salvia splendens ]

    Gene ID: 121790067, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC121790067
    Gene description
    metal tolerance protein 10-like
    Locus tag
    SASPL_155574
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salvia splendens
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salviinae; Salvia; Salvia subgen. Calosphace; core Calosphace
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    Genomic context

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    See LOC121790067 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current SspV2 (GCF_004379255.1) Unplaced Scaffold NW_024599048.1 (11829..15582, complement)

    NW_024599048.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024599048 Unplaced Scaffold Reference SspV2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables monoatomic cation transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in monoatomic cation transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    metal tolerance protein 10-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Salvia splendens Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SspV2 Primary Assembly

    Genomic

    1. NW_024599048.1 Reference SspV2 Primary Assembly

      Range
      11829..15582 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042188363.1 → XP_042044297.1  metal tolerance protein 10-like isoform X1

      UniProtKB/TrEMBL
      A0A8X8VY92, A0A8X8XUA5
      Conserved Domains (1) summary
      COG0053
      Location:99 → 386
      FieF; Divalent metal cation (Fe/Co/Zn/Cd) transporter [Inorganic ion transport and metabolism]

    2. XM_042188364.1 → XP_042044298.1  metal tolerance protein 10-like isoform X2

      Conserved Domains (1) summary
      COG0053
      Location:16 → 303
      FieF; Divalent metal cation (Fe/Co/Zn/Cd) transporter [Inorganic ion transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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