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    Pez protein tyrosine phosphatase non-receptor pez [ Bombus pyrosoma ]

    Gene ID: 122568015, updated on 10-Oct-2024

    Summary

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    Gene symbol
    Pez
    Gene description
    protein tyrosine phosphatase non-receptor pez
    See related
    EnsemblRapid:ENSBPYG00000017052
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bombus pyrosoma
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Melanobombus
    Orthologs
    fruit fly honey bee all
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    Genomic context

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    See Pez in Genome Data Viewer
    Location:
    chromosome: LG5
    Exon count:
    9
    Annotation release Status Assembly LG Location
    100 current ASM1482585v1 (GCF_014825855.1) LG5 NC_057774.1 (4094323..4096942)

    Linkage Group LG5 - NC_057774.1Genomic Context describing neighboring genes Neighboring gene dual specificity protein phosphatase 10-like Neighboring gene UNC-79 domain-containing protein Neighboring gene Uroporphyrinogen III synthase 1 Neighboring gene serrano Neighboring gene lysM and putative peptidoglycan-binding domain-containing protein 3 Neighboring gene ribosomal protein S11

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_057774.1 Chromosome LG5 Reference ASM1482585v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytoskeletal protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tyrosine-protein phosphatase non-receptor type 14

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Bombus pyrosoma Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1482585v1

    Genomic

    1. NC_057774.1 Reference ASM1482585v1

      Range
      4094323..4096942
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043727283.1 → XP_043583218.1  tyrosine-protein phosphatase non-receptor type 14 isoform X1

      Related
      ENSBPYP00000029504.1, ENSBPYT00000002776.1
      Conserved Domains (3) summary
      smart00295
      Location:39 → 238
      B41; Band 4.1 homologues
      cd13188
      Location:233 → 324
      FERM_C_PTPN14_PTPN21; FERM domain C-lobe of Protein tyrosine phosphatase non-receptor proteins 14 and 21 (PTPN14 and 21)
      cd17099
      Location:32 → 118
      FERM_F1_PTPN14_like; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in tyrosine-protein phosphatase non-receptors PTPN14, PTPN21, and similar proteins

    2. XM_043727287.1 → XP_043583222.1  tyrosine-protein phosphatase non-receptor type 14 isoform X2

      Conserved Domains (3) summary
      smart00295
      Location:25 → 224
      B41; Band 4.1 homologues
      cd13188
      Location:219 → 310
      FERM_C_PTPN14_PTPN21; FERM domain C-lobe of Protein tyrosine phosphatase non-receptor proteins 14 and 21 (PTPN14 and 21)
      cd17099
      Location:18 → 104
      FERM_F1_PTPN14_like; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in tyrosine-protein phosphatase non-receptors PTPN14, PTPN21, and similar proteins

    3. XM_043727284.1 → XP_043583219.1  tyrosine-protein phosphatase non-receptor type 14 isoform X2

      Conserved Domains (3) summary
      smart00295
      Location:25 → 224
      B41; Band 4.1 homologues
      cd13188
      Location:219 → 310
      FERM_C_PTPN14_PTPN21; FERM domain C-lobe of Protein tyrosine phosphatase non-receptor proteins 14 and 21 (PTPN14 and 21)
      cd17099
      Location:18 → 104
      FERM_F1_PTPN14_like; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in tyrosine-protein phosphatase non-receptors PTPN14, PTPN21, and similar proteins

    4. XM_043727285.1 → XP_043583220.1  tyrosine-protein phosphatase non-receptor type 14 isoform X2

      Related
      ENSBPYP00000029503.1, ENSBPYT00000002775.1
      Conserved Domains (3) summary
      smart00295
      Location:25 → 224
      B41; Band 4.1 homologues
      cd13188
      Location:219 → 310
      FERM_C_PTPN14_PTPN21; FERM domain C-lobe of Protein tyrosine phosphatase non-receptor proteins 14 and 21 (PTPN14 and 21)
      cd17099
      Location:18 → 104
      FERM_F1_PTPN14_like; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in tyrosine-protein phosphatase non-receptors PTPN14, PTPN21, and similar proteins

    5. XM_043727286.1 → XP_043583221.1  tyrosine-protein phosphatase non-receptor type 14 isoform X2

      Conserved Domains (3) summary
      smart00295
      Location:25 → 224
      B41; Band 4.1 homologues
      cd13188
      Location:219 → 310
      FERM_C_PTPN14_PTPN21; FERM domain C-lobe of Protein tyrosine phosphatase non-receptor proteins 14 and 21 (PTPN14 and 21)
      cd17099
      Location:18 → 104
      FERM_F1_PTPN14_like; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in tyrosine-protein phosphatase non-receptors PTPN14, PTPN21, and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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