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    PP2D1 protein phosphatase 2C like domain containing 1 [ Bubalus bubalis (water buffalo) ]

    Gene ID: 102409352, updated on 10-Mar-2024

    Summary

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    Gene symbol
    PP2D1
    Gene description
    protein phosphatase 2C like domain containing 1
    See related
    EnsemblRapid:ENSBALG00030017963
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bubalus bubalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
    Orthologs
    human mouse all
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    Genomic context

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    See PP2D1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current NDDB_SH_1 (GCF_019923935.1) 1 NC_059157.1 (201981498..201999657, complement)
    102 previous assembly NDDB_DH_1 (GCF_019923925.1) 1 NC_058343.1 (200654648..200672816, complement)

    Chromosome 1 - NC_059157.1Genomic Context describing neighboring genes Neighboring gene EF-hand domain family member B Neighboring gene uncharacterized LOC112587308 Neighboring gene RAB5A, member RAS oncogene family Neighboring gene uncharacterized LOC123335301 Neighboring gene lysine acetyltransferase 2B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein serine/threonine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein phosphatase 2C-like domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NDDB_SH_1 Primary Assembly

    Genomic

    1. NC_059157.1 Reference NDDB_SH_1 Primary Assembly

      Range
      201981498..201999657 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006071959.4 → XP_006072021.4  protein phosphatase 2C-like domain-containing protein 1

      Related
      ENSBALP00030033890.1, ENSBALT00030050390.1
    Nucleotide Protein
    Heading Accession and Version

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