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    LOC121554853 E3 ubiquitin-protein ligase MYCBP2-like [ Coregonus clupeaformis (lake whitefish) ]

    Gene ID: 121554853, updated on 28-May-2024

    Summary

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    Gene symbol
    LOC121554853
    Gene description
    E3 ubiquitin-protein ligase MYCBP2-like
    See related
    EnsemblRapid:ENSCCFG00005008756
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Coregonus clupeaformis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Coregoninae; Coregonus
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    Genomic context

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    See LOC121554853 in Genome Data Viewer
    Location:
    chromosome: 40
    Exon count:
    81
    Annotation release Status Assembly Chr Location
    101 current ASM2061545v1 (GCF_020615455.1) 40 NC_059231.1 (35786681..36109741, complement)
    100 previous assembly ASM1839867v1 (GCF_018398675.1) 40 NC_055106.1 (27609724..27932811, complement)

    Chromosome 40 - NC_059231.1Genomic Context describing neighboring genes Neighboring gene cysteine-rich DPF motif domain-containing protein 1-like Neighboring gene DENN domain-containing protein 2A-like Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene sciellin Neighboring gene histone H3-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase MYCBP2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Coregonus clupeaformis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2061545v1 Primary Assembly

    Genomic

    1. NC_059231.1 Reference ASM2061545v1 Primary Assembly

      Range
      35786681..36109741 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045212139.1 → XP_045068074.1  E3 ubiquitin-protein ligase MYCBP2-like isoform X1

      Related
      ENSCCFP00005021863.1, ENSCCFT00005023352.1

    2. XM_045212140.1 → XP_045068075.1  E3 ubiquitin-protein ligase MYCBP2-like isoform X2

      Related
      ENSCCFP00005021228.1, ENSCCFT00005022613.1
    Nucleotide Protein
    Heading Accession and Version

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