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    VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 [ Gallus gallus (chicken) ]

    Gene ID: 776358, updated on 17-Aug-2024

    Summary

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    Symbol
    VOPP1provided by CGNC
    Full Name
    vesicular, overexpressed in cancer, prosurvival protein 1provided by CGNC
    Primary source
    CGNC:57878
    See related
    Ensembl:ENSGALG00010007183
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See VOPP1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (51649177..51743374)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (51703426..51797960)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene biliverdin reductase A Neighboring gene uncharacterized LOC107052507 Neighboring gene uncharacterized LOC107052506 Neighboring gene uncharacterized LOC112531738 Neighboring gene uncharacterized LOC112531739 Neighboring gene LanC like 2 Neighboring gene uncharacterized LOC124417785 Neighboring gene epidermal growth factor receptor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in cytoplasmic vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vesicular, overexpressed in cancer, prosurvival protein 1
    Names
    VOPP1, WBP1/VOPP1 family member

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      51649177..51743374
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046938357.1 → XP_046794313.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X4

    2. XM_046938358.1 → XP_046794314.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X4

    3. XM_040692589.2 → XP_040548523.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XS90, A0A8V0XX14
      Related
      ENSGALP00010009546.1, ENSGALT00010017137.1
      Conserved Domains (1) summary
      NF033761
      Location:71 → 136
      gliding_GltJ; adventurous gliding motility protein GltJ

    4. XM_040692554.1 → XP_040548488.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X8

    5. XM_015281609.4 → XP_015137095.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X4

    6. XM_004939605.5 → XP_004939662.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1L1RMG2, A0A8V0XX14
      Related
      ENSGALP00010009542.1, ENSGALT00010017133.1
      Conserved Domains (1) summary
      NF033761
      Location:86 → 151
      gliding_GltJ; adventurous gliding motility protein GltJ

    7. XM_001235487.7 → XP_001235488.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X2

      Conserved Domains (1) summary
      NF033761
      Location:83 → 148
      gliding_GltJ; adventurous gliding motility protein GltJ

    8. XM_025147590.3 → XP_025003358.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X7

    9. XM_025147589.3 → XP_025003357.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X6

    10. XM_040692610.2 → XP_040548544.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X5

    11. XM_046938359.1 → XP_046794315.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X4

    12. XM_046938356.1 → XP_046794312.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X7

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      51703426..51797960
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046912331.1 → XP_046768287.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X4

    2. XM_046912332.1 → XP_046768288.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X4

    3. XM_040664484.2 → XP_040520418.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XS90, A0A8V0XX14
      Conserved Domains (1) summary
      NF033761
      Location:71 → 136
      gliding_GltJ; adventurous gliding motility protein GltJ

    4. XM_040664485.2 → XP_040520419.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X4

    5. XM_040664482.2 → XP_040520416.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1L1RMG2, A0A8V0XX14
      Conserved Domains (1) summary
      NF033761
      Location:86 → 151
      gliding_GltJ; adventurous gliding motility protein GltJ

    6. XM_040664483.2 → XP_040520417.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X2

      Conserved Domains (1) summary
      NF033761
      Location:83 → 148
      gliding_GltJ; adventurous gliding motility protein GltJ

    7. XM_040664489.2 → XP_040520423.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X7

    8. XM_040664488.2 → XP_040520422.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X6

    9. XM_040664487.2 → XP_040520421.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X5

    10. XM_046912333.1 → XP_046768289.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X4

    11. XM_046912334.1 → XP_046768290.1  vesicular, overexpressed in cancer, prosurvival protein 1 isoform X7

    Nucleotide Protein Strain
    Heading Accession and Version

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