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    gal3st1a galactose-3-O-sulfotransferase 1a [ Hippoglossus stenolepis (Pacific halibut) ]

    Gene ID: 118115671, updated on 8-May-2024

    Summary

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    Gene symbol
    gal3st1a
    Gene description
    galactose-3-O-sulfotransferase 1a
    Locus tag
    HST_G00096900
    See related
    EnsemblRapid:ENSHSTG00010008557
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hippoglossus stenolepis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
    Orthologs
    human zebrafish all
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    Genomic context

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    See gal3st1a in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    101 current HSTE1.2 (GCF_022539355.2) 9 NC_061491.1 (15231684..15237324, complement)
    100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 9 NC_048935.1 (15117660..15123314, complement)

    Chromosome 9 - NC_061491.1Genomic Context describing neighboring genes Neighboring gene claudin 26 Neighboring gene leucine zipper like post translational regulator 1 Neighboring gene pescadillo Neighboring gene purinergic receptor P2X, ligand-gated ion channel, 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables galactosylceramide sulfotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in galactosylceramide biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in myelination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    galactosylceramide sulfotransferase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HSTE1.2 Primary Assembly

    Genomic

    1. NC_061491.1 Reference HSTE1.2 Primary Assembly

      Range
      15231684..15237324 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035166983.2 → XP_035022874.1  galactosylceramide sulfotransferase isoform X1

      Related
      ENSHSTP00010018765.1, ENSHSTT00010020893.1
      Conserved Domains (1) summary
      cl22970
      Location:11 → 420
      Sulfotransfer_2; Sulfotransferase family

    2. XM_035166984.2 → XP_035022875.1  galactosylceramide sulfotransferase isoform X2

      Related
      ENSHSTP00010018763.1, ENSHSTT00010020891.1
      Conserved Domains (1) summary
      cl22970
      Location:1 → 410
      Sulfotransfer_2; Sulfotransferase family
    Nucleotide Protein
    Heading Accession and Version

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